| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62908 |
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| Symbol | |
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| ID | 4840572 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 110519 |
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| End bp | 113368 |
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| Gene Length | 2850 bp |
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| Protein Length | 879 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391887 |
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| Product | predicted protein |
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| Protein accession | XP_001386236 |
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| Protein GI | 150866587 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTG AAGTCAATGA CAAGTCCAAC CAACAGTATT ACACCAAAGT GATCAACCAC
GAATTCCGGA ACCTCCAGCT CGATCCTGAA TTAGCGTCAA AATCGCTATT TGATCTCATT
GACTACTGTG AACTTTTATA CGAGAAGTCT GCCACGGCGT TCTCTTCCGG TGATCACCAC
AACGGATTGA AGAATTACAT CAAGGGATAC TTGATCTTCA ACTATTTCAT TAACAGCTTC
ATTATGCTCC ACTTTAAGGG CTTTGACGCC TTTGTCGAGT CCAACGAGCA GGACTTCATC
ATCTATCTCA ATGTATTTGC CTTTTATAAC GCTGACGACA TTATACGAAA CAGCTCACAC
ACAGTTTCGC TGGCGACGCT TCGCGGCTAC ATCAAAAAGT ACCTTGTCGA CTCAAACTTG
CTTAGTTTTA ACGTGGAGGA GCTTTATGCC TGGCTCCATG AGTATATAAA ATACCTCAAG
GAAAAAGACC GATCCATGGT GGAAATCAAT ATCTCCAGTG GTGACGAAAT GCGCTCAGAT
GGTGATCTTT TTGTCGAAAC TGCAACGTCG TCTTCAACAA GACAGACGTC TAATGGAAAT
TCTCTGATCA CAAAGTCAAA GAAAACTTAC AGTTTGAACC CGCTTTTGAA CCCGGAATTG
AACTCTAGTG AAGAGTTCCT AACAGTGGCC GATAAAAGTC AAAATACCTA TGGTAGCGAC
ACTAGACAAG ACTATAACGA TAACTATGAC CAATACATTC AAGAAAAAGA GGCCCTTCTG
CCAAGCGATT CTGTCTCAGA ATTCAAGCAC AGATTTCCGT CCTTAAATGG GAAAAATGAT
ACATCGCTCT TTGGTTCTAA GAAGCTTCCT CCACCTTCGC CTCCAAATAT TCCACATCCA
ATTCCAAAGC ACTTTTCTCC ATCTTTGCTT CCTCCACATT CTCCGCCACC TCCTCCGCCT
CATTCTGCTG CAAATACATT ACAACCAAAT AGAGCTAGTA CGTTTCCAGG ATCACCTACA
GCTTCGGCTC CGTATCCTCC TGACGAAATT ACAAGCAGAT CACCAATTCC GTCGCCAATA
TCTCCGGGTT TGAGATCTCC GGTTGCTCCA GAATTGGCCA ACGATACAGA CGAGTGGTAT
TTCCTGAATC CACAAAAATC ACCTACTGAT GCAAACCCAA ATACAAATTC ATATAGCAAT
CTACAGAACA ATAGCGGCAA TATTTCCCAC CGTCCTCCAC AAACGATTCC CATAGCTAGG
CCGGTGACGC TGCCTACAAA CGTCAATGTC CATTACAATA GTCACGAAAT CCACCAACAG
AATGGTAACA ATAACCACTA CATGAATAAC AATAATGTCT TTCACAATGG CCAACAATCC
AACAACCCAT TTCCTAACTA TCCTCAACAG CAAGAGGTAG GCCAGCAAGT AAATCAACAA
GGAGCGAATG GTTATTATGA CAATAATGGT CCTAGCAGTG TGCAACATTT CGGAGCACCT
CGCTCTTCTG TTCCTCAACA TGTGCAGATG CAACAGTATC AGATCAAAAC TCAGAAGCAG
CAATACATGC AAGAGTATTC TGTTTGTGGA TTGAGAAACT TTGGTTCTTC CTGTTATATC
AACCTGACAA TACAGTTGAT ATTCGGTGTT CTGTTGTTCA AGTCGTTGTT CATCAACCTG
GCGTACCAGA GATATGTCAA GGATCCCAAG TACTTGAGAC TTATCCTGTC GCTGAAGTTG
AACAGTCACC ACAAAGATTC TATTCTTCTC TCTGAAGCAA TTTCAGCATT GTTACGAACT
TTCTCACAGC ATGGAAGTGT TTCTATAGCT CCTACAAAGT TCATCAGAGT GACGTCCTTG
TTGAAGCCAG ACTTCAATAT TCCATACGAA CAGCAGGATG CACAGGAGTT TCTACTCTTT
GTTTTGGAGA GACTTCATCT GGAGTTGTCC AATAAGAGCA TTGAAACCAA CTACGAGCTA
GAGGACTATA TTCGTAAGTG GGATATTAAT GTCAATATGA AGGATAGAAA CGAATACTTG
AAGTGGTACT TGTCCCTTGT GAAACTGGAA GGAACGTCTC CAGTCCATGA TCTTTTCCAG
GGCCACTTGC AAAACAAATT GACATGTAAT TCTTGTGGAT ATGAGTCTAT TAGTTATTCT
CCATTTACCA TTTTGTCACT ACCGATTCCA AGCAGCCATA GCAGTAAGAA TGTGGTCAAC
TTAGCCGATT GTTTACGCTA CTACTCCCAG GATGAAGTTC TCAGTGGAGA AAATGCCTGG
AACTGTCCCA AGTGTAGCAA GAACGGAGAC CAAGTTTCTG CTAGCAGTGT TCTTGATAAT
CATCCTGTTT TCGTCAACAA GAAGTCAGGA ATCTTCAAAC TAGGCAGAAG AAGCAAATCG
CCTTCTTCTC AGACGAGCAC GAAAACAACG ACAAGTTCCA TTCACTCCAA CATTTCAACG
AAGAGTTTGA ACTTCATCAA ATTGCCACAG ATTTTGATTA TTCAACTCTC CCGGTTTTCA
GTCTTCAACT TGACTGATAA GTTAGACACA TACATTCAAT ATCCGTTGAA ATTGAAGTTC
AATAATGACG GTCATGAAAT TGTGTACAAA TTATCCGGTT TGATAAATCA CTTTGGTAAT
CTTAAAAGCG GGCACTACAC ATCCATTGTC AACAAATCTA CGGTCAATCA AAATCTAGGA
AGTAATTTGG ACAATCTCAA AGTTCCTTAT TGGTGTTTGT TTGATGATGA GAATGTGAAG
GTGAACTTGC CTCACGGAAG TATTACGCAG CCTGGTATGG GTGCTATCAA CTCCAAGGAT
GTCTATGTGT TGTGCTACGA ACGAGTCTAA
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| Protein sequence | MNSEVNDKSN QQYYTKVINH EFRNLQLDPE LASKSLFDLI DYCELLYEKS ATAFSSGDHH
NGLKNYIKGY LIFNYFINSF IMLHFKGFDA FVESNEQDFI IYLNVFAFYN ADDIIRNSSH
TVSSATLRGY IKKYLVDSNL LSFNVEELYA WLHEYIKYLK EKDRSMVEIN ISSGDEMRSD
GDLFVETATS SSTRQTSNGN SSITNDSVSE FKHRFPSLNG KNDTSLFGSK KLPPPSPPNI
PHPIPKHFSP SLLPPHSPPP PPPHSAANTL QPNRASTFPG SPTASAPYPP DEITSRSPIP
SPISPGLRSP VAPELANDTD EWYFSNPQKS PTDANPNTNS YSNLQNNSGN ISHRPPQTIP
IARPVTSPTN NGNNNHYMNN NNVFHNGQQS NNPFPNYPQQ QEVGQQVNQQ GANGYYDNNG
PSSVQHFGAP RSSVPQHVQM QQYQIKTQKQ QYMQEYSVCG LRNFGSSCYI NSTIQLIFGV
SLFKSLFINS AYQRYVKDPK YLRLISSSKL NSHHKDSILL SEAISALLRT FSQHGSVSIA
PTKFIRVTSL LKPDFNIPYE QQDAQEFLLF VLERLHSELS NKSIETNYEL EDYIRKWDIN
VNMKDRNEYL KWYLSLVKSE GTSPVHDLFQ GHLQNKLTCN SCGYESISYS PFTILSLPIP
SSHSSKNVVN LADCLRYYSQ DEVLSGENAW NCPKCSKNGD QVSASSVLDN HPVFVNKKSG
IFKLGRRSKS PSSQTSTKTT TSSIHSNIST KSLNFIKLPQ ILIIQLSRFS VFNLTDKLDT
YIQYPLKLKF NNDGHEIVYK LSGLINHFGN LKSGHYTSIV NKSTVNQNLG SNLDNLKVPY
WCLFDDENVK VNLPHGSITQ PGMGAINSKD VYVLCYERV
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