Gene PICST_50000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50000 
SymbolAXL2 
ID4840578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp66386 
End bp69067 
Gene Length2682 bp 
Protein Length893 aa 
Translation table12 
GC content46% 
IMG OID640391893 
Productpolarity establishment/cellular polarization 
Protein accessionXP_001386226 
Protein GI150866579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.457642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTCA TCTTGGTTTT CTTGATGGCG ATAGCCTCGG CACAGATCGA AGTGGGGTTC 
CCCTTCAACG AACAGTTGCC TAATGTCGCC CGTATTGACA CGGCCTACTC CTTTACCATG
GCCAATATCA CCTACAAATC CGATAACTTC GGCGTAATCT CGTACCAGGC CACAGGGCTT
CCTCTGTGGT TGAGCTTTGA CTCTGACTCC AGAACATTCA CCGGAACTCC CTCCAAGGAC
GACGTGCAAG AGTTTGAAAT CCATTTGTTC GGAACTGACT CGTCAGACGG TTCTACTATC
AACAACACCT ACTCTATGAT AGTTTCCAAC GATACAGGCT TACACTTATC CTCTAATGAT
GTCATGTTTA CTGAAATTGC CAAATACGGA GACACCAACG GTAATGACGG CTTGGTTGTC
AGAGAGGGCC AGGAGTTCAA CATCAGCTTC GAAAAGTCGG TTTTCGAATC TTACTCAACA
TCCAAAAGAC CTATCGTTGC CTACTATGGT AGGTCAGCGG ACAGAAGCTC CTTGCCAAAC
TGGATCGATT TCGACTCCGA CAGCTTAACA TTCTCAGGAA TAGTTCCTCA CGTTGTTTCA
GATATTGCTC CTTCGTTTGA GTATGGCTTC AGCTTCATTG GCTCCGACTA TGTAGGATTT
GCTGGAGCTG AAGGTATCTT CAAGTTGATT GTTGGAGCCC ATCTGTTGAG CACTTCGTTG
AATGAGTCAA TCAAGGTCAA TGGTACTTTG AATCACGACT TCGACATCCT GATTCCAATC
TTCTCTTCTG TTTTCTTGGA CGGATCACTT ATCTCGGCCG AAAACATCTC CTCTGTTGAT
TCAACCGACT TACCCTCTTG GATTCATCTT GACACCGACC ATTACACTTT GACAGGTAAC
TTCCCTGGGG ATGCTACTTT TGACAACTTC ACCATAAACG TCAAAGACGT GTTCCAGAAC
GAGGTTGAAT TGCCTTACTC TTTCAACGCC ATTGGCTCAG TGTTCACTCT CAGCACTCTC
CCCAACGTCA ATGCTACCCG TGGACAGTTC TTTGAATACC ACTTGATGAA CTCATACTTC
ACTGATTTCA ACCTGACCGA CGTCTCTGTC AAGTTCGACT CTTCCAACAG CTGGCTTACT
TTCCATGAAG ATAACAATAC CTTCACCGGT CAAGTCCCCA AGGATTTGCA GAAGATCAAT
GTCGATGTGT CTGCTTCTTC CGATTACGAT CTGGAAGATA AGAGCTTTGA CATTGTTGGA
ATCGACAGCA AGACATCCTC CACTTCCTCT TCCTCTTCCG CTACCGCGAC TTCTTCTAGC
TCCTCTTCTC CAACTTCCTC TCCCTCTTCC TCTTCTACTC CTGTAAAGTC CAAGGCTTCC
ACGAACCACA AGGCACTTGC AATTGGTCTT GGAGTGGGTA TTCCTGCCTT CTTGCTTCTT
GTCGCTGCCC TCATTCTCTT CTGCTGCTGT ATCAAGAGAA GAAAAGAAAG AAAGCAAGAC
CCAAGAAAGG ACATGGAAAA GGATGCTGCT GTTCCCGAAT TGACCGGCCC AGGCTTCGGC
AACACCTACG ACAACGATTC CCAGAAAGGT AGAAAGTTGG CTGCTGCTAA TGCCAGAAAG
TTGGACAATA CCAAACCTTA CGACTACGAC GACGACATCC ACAGTACTTC ATCTTCCATC
ACCCATGTGG AATCCAACGG CTCTGCTGCT AGATATGTAG ATGCCATCGA GTTACCAGTC
AAGTCATGGA GAGCAAGAGA CAATTCTGAC GACAAGCAGA ATAGAAATTC AGAAGTTTCC
TTGAGCACAG TCAACACAGA ACAGTTGTTC TCAGTAAGAC TTGTGGACGA CCAGTCAGCC
AGAAACTCTC AGCAATCTTC TTTTGTCGCC CGTCAACTTT TAAGTAGCAC TTCCTTGCAT
GAAGTCATGA GAAGAGACTC TTCTACCAAT CTCCAAAGAT TGGACAGTGA TGGAAACATC
GTTGACTCTG CAACCTCCAG CAATGCATCA ACGCCTAGTC CCTGGAAGAC GGTCCCCAAA
TCAGGCTCGA TTCTTGCTAT TCTCCCTGAA GAAAACTCCA GGGAGTACAC CAACTCTGTG
AGAAATGCAA CGGATACCTC GACCGTTTAT CTCAGTGCAG ACCACAGCAC CAATAGTAAT
AATAGCAACA GCCACACAAG CAGGCACGAT TTCTCGGAGT CAAGTATATC GAATTTGTTG
TCTAAGTTCA ACGAGTCTCC TTCAGGAAGC GAAAGAGATT TATCGCAATA CCAACATGAA
GACTCTGCGT ACCTTGATGA ATTCAAGGCT GTCAAGACTT CTAACGGAGA CTTCCAGTGG
CTGTCTGACC GTACTGACCG CAGCAGTGAA GATAATACCG ACTTGATGCA CAAGACTGCA
TCGAACTTCA ACTTGAGTCA TGATGACTTG GCTATTGCAA CTAAGACGTT GCCCATGAGA
CACTCCAATT TATCTACCAT TTCGATAGAA TCTGGCAACT CTGATCAGAT GTTGCTCAAC
CACGATGGTA GTCCTCAGAT CCCCAAGCGT TCCAGATCGC GCACTAGCAA GGCGAAATTG
GTTAACTTCA CCAGAAAGGG CAGTTTGAGA GAGTCATCGT ATGAACCTGA TATCAAATTC
CATGAGGAGT CAGCGCAGGT TCACAGCAAT GACAGCGACT AG
 
Protein sequence
MLFILVFLMA IASAQIEVGF PFNEQLPNVA RIDTAYSFTM ANITYKSDNF GVISYQATGL 
PSWLSFDSDS RTFTGTPSKD DVQEFEIHLF GTDSSDGSTI NNTYSMIVSN DTGLHLSSND
VMFTEIAKYG DTNGNDGLVV REGQEFNISF EKSVFESYST SKRPIVAYYG RSADRSSLPN
WIDFDSDSLT FSGIVPHVVS DIAPSFEYGF SFIGSDYVGF AGAEGIFKLI VGAHSLSTSL
NESIKVNGTL NHDFDISIPI FSSVFLDGSL ISAENISSVD STDLPSWIHL DTDHYTLTGN
FPGDATFDNF TINVKDVFQN EVELPYSFNA IGSVFTLSTL PNVNATRGQF FEYHLMNSYF
TDFNSTDVSV KFDSSNSWLT FHEDNNTFTG QVPKDLQKIN VDVSASSDYD SEDKSFDIVG
IDSKTSSTSS SSSATATSSS SSSPTSSPSS SSTPVKSKAS TNHKALAIGL GVGIPAFLLL
VAALILFCCC IKRRKERKQD PRKDMEKDAA VPELTGPGFG NTYDNDSQKG RKLAAANARK
LDNTKPYDYD DDIHSTSSSI THVESNGSAA RYVDAIELPV KSWRARDNSD DKQNRNSEVS
LSTVNTEQLF SVRLVDDQSA RNSQQSSFVA RQLLSSTSLH EVMRRDSSTN LQRLDSDGNI
VDSATSSNAS TPSPWKTVPK SGSILAILPE ENSREYTNSV RNATDTSTVY LSADHSTNSN
NSNSHTSRHD FSESSISNLL SKFNESPSGS ERDLSQYQHE DSAYLDEFKA VKTSNGDFQW
SSDRTDRSSE DNTDLMHKTA SNFNLSHDDL AIATKTLPMR HSNLSTISIE SGNSDQMLLN
HDGSPQIPKR SRSRTSKAKL VNFTRKGSLR ESSYEPDIKF HEESAQVHSN DSD