Gene PICST_49700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49700 
Symbol 
ID4840449 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp637969 
End bp638904 
Gene Length936 bp 
Protein Length245 aa 
Translation table12 
GC content39% 
IMG OID640391764 
Productuncharacterized conserved hypothetical protein 
Protein accessionXP_001386316 
Protein GI150866649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.372603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTT CGCGTGGAAA GTTATGTACG CCTAGAGCAT TATTAGCTGT CGAATCGTTG 
GACTCTGATA ATGGAATTGA CTACCTTCCT CTGACTCTTA AGGAAAGTAT CTGGTCGACT
TCTTTCAGAT CTAATCGGGT AGACATCTTC CTGCCAACAG TTAGTCCCGT TGAGATTTGT
ACCTTGGATC GTCAGAATCA GTACGAACAG AATCAGTACG AAACTCAAAG ATTAAATAGT
TCCAGAACAA TTGGTTATGC TTCTCTGAAA TCGAATTATG ATCATTTTGG AGAAGCTCAA
CCAAAAAGAC TTTCATATTC TTTGGGCTCA ACTCAGTCGT TCAACTCCTT GAATTCTGCT
CCAATTACAC CAGAATCACC TACTGCTTCT AACTATAAGA GAATTCATAC AGGGTCTATT
GGAAGTCCAC ATTTATGCCT CACGTTTAGA ACGTACAAAG GCACAGTTTT CACAGTTCCT
CCTAACTCTA AGTTCTTTGT TATTAAATCG TACAATATTC TTGACGTTAC TTCCTCGTTT
ACTCACAATA TCTGGACTTC CACTGACCTT GGAAACAAAA GGTTGAATAA AGCTTACGAA
GAACTTCTGT TCACTGGCAA CAAAGACAAT TGCGGCAAGG TTTTTCTATT TTTTCTGGTC
AACTCCTCGG GCAAGTTCTG TGGGGTTTGT GAGATGAAAG CTGGCATTGA TTTTAATAAA
ACCAGTGATA TTTGGATGGA ACAAACTCGC TGGAAAGGTG AATTCCCAGT TGAATGGTTG
CTCATAAAGG ATGTTCCCAA TAGGTTCTTT CAGCACCTTA AAATTCCTTC GAATGAGTAC
AAGCCGGTTA CGAATTCAAG AGATACTCAA GAAATTCCAT ATGACATTGG AGTATCAATG
TTGAAGATTA TCAGTTCTTT CAAGTACAAT GGATAG
 
Protein sequence
MSSSRGKLCT PRALLAVESL DSDNGIDYLP STLKESIWST SFRSNRSFNS LNSAPITPES 
PTASNYKRIH TGSIGSPHLC LTFRTYKGTV FTVPPNSKFF VIKSYNILDV TSSFTHNIWT
STDLGNKRLN KAYEELSFTG NKDNCGKVFL FFSVNSSGKF CGVCEMKAGI DFNKTSDIWM
EQTRWKGEFP VEWLLIKDVP NRFFQHLKIP SNEYKPVTNS RDTQEIPYDI GVSMLKIISS
FKYNG