Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_49619 |
Symbol | |
ID | 4840631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 792793 |
End bp | 793314 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391946 |
Product | predicted protein |
Protein accession | XP_001386165 |
Protein GI | 150866528 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.624995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.141248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGAT ATATAAAGGG TGATTTGTTA GGTCATCTTC CACCAAGCAA GTCTTCGGTT GCTGTCTTTG CTCATGCTTG CAATTGCCAG GGTGTCTGGG GAGGAGGAAT CGCTGCTGTG CTCAGAGTGA AATTTCCTTC TACCTATCCT TTGTATTCTG GTCATTGCCA GGAAAAAGGA TGTGATCCAC ATAGACTTTT GGGAACATCT GTCGTAGTGC CCTCACAAGC TCTGGATCCG GGAAACATCG CTGGATACCC CCCTAAATAC ATCGCCTGTT TGTTCACCAG CGACTTTGCC CAGACCCAAG AGGAGATTGT AGCATATACA GATTCTGCCA TAGAGGCACT CGTGGATCAA CTAAAAGAAT TACAAAAGAC AACTGCAATT GAGACCGGAC AAAGCGGTAA GATCGTTGTA AATATGCCCA AGATCAATGC TGGAATCTTT GCTGTTCCTT GGGAGAAGAC TGAAGCCGTA TTGAAGAAAT ACGATGTGGA GTTTAATGTT TATGTTATAT GA
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Protein sequence | MIRYIKGDLL GHLPPSKSSV AVFAHACNCQ GVWGGGIAAV LRVKFPSTYP LYSGHCQEKG CDPHRLLGTS VVVPSQASDP GNIAGYPPKY IACLFTSDFA QTQEEIVAYT DSAIEALVDQ LKELQKTTAI ETGQSGKIVV NMPKINAGIF AVPWEKTEAV LKKYDVEFNV YVI
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