Gene PICST_49415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49415 
Symbol 
ID4840740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp109549 
End bp110352 
Gene Length804 bp 
Protein Length267 aa 
Translation table12 
GC content39% 
IMG OID640392055 
Productpredicted protein 
Protein accessionXP_001386037 
Protein GI126139029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAG CGGAAATAGG TACAGCGAAG TACCAATCCA AGAAGCTCAA GATGGCGGGA 
CTCCAGAAAC TTAAATTTTA TTGCCAGCTT TGTGAAAAAC AGTGTAGAGA TGCTAATGGA
TTCAAGAATC ATATTGCCTC TCCAAGTCAT CAGAGGAAAA TTCAATCTCT CAATGATGAA
GGACAAGGTA AAACAGTTGT AGAAAACTAC TCAGAGCAGT TTGAGAAAGA CTTCATGAGG
TTGTTGAGGA TAAATCATGG TACAAAGAAG ATCAATGCTA ACAAATTCTA CCAAGAATAC
ATATTGAATG ATAGAGATCA CGTCCATATG AACTCTACGA AGTGGTCCAG CCTCACCTCT
TTCATCAAAT ATTTGGGACA AAGAGGTTTG GTACGTGTGG AACAGGGAGG TTCCGGAAAC
GAAGACGAGT TTAACCTTGA AATACGTTTG GTAGACCAAT CTATCGAGAT TCAACAGAAC
CAAAAGGAGA AGCTTAAGGC TGAAAACAAA CGTTCAGATG AACAGTTAAC CAATAAGTTC
CTCGAAGAAC AAATAAGAAG AGGGAAAGAG TCTGCCAAAT TAAACGAAGA GAGCCAACCT
GAAGATGTGC AAGTACCGGT TACAGTTCAA TCGGGTCCTA TTAAGGTATC TTTAAAATCA
ACAGGCATAA CAAAGAAATT ACAAAGACCT TCTAAATCAA TTTTTGGTGA CGCTGCATCA
GATGACGAAG TTGAAGCTGA CAAGAAGCCA GAGCCGAAAG AAACTAAAGG TAAGATAAAA
TTCGGTTCTA TTAAGAAACA CTAA
 
Protein sequence
MARAEIGTAK YQSKKLKMAG LQKLKFYCQL CEKQCRDANG FKNHIASPSH QRKIQSLNDE 
GQGKTVVENY SEQFEKDFMR LLRINHGTKK INANKFYQEY ILNDRDHVHM NSTKWSSLTS
FIKYLGQRGL VRVEQGGSGN EDEFNLEIRL VDQSIEIQQN QKEKLKAENK RSDEQLTNKF
LEEQIRRGKE SAKLNEESQP EDVQVPVTVQ SGPIKVSLKS TGITKKLQRP SKSIFGDAAS
DDEVEADKKP EPKETKGKIK FGSIKKH