| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37009 |
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| Symbol | GAP1.4 |
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| ID | 4840622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 711199 |
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| End bp | 712938 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391937 |
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| Product | general amino acid permease |
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| Protein accession | XP_001386332 |
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| Protein GI | 150866664 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.367656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA AAGCATCTTC TGAGAAATAC AGCACAGAGT CAGACCACTC CAATGAAGGA
GTGGTTCCTA CACAACCAAC AAATACCCAG TCCAGTAGGT GGACTGGATT CAAAGATTCC
TTCAAGAGAG TCGAGATAGA CAACCAAACA ACTTACGACC TTAACGATAT AGAAAGGGCT
AATGCAGCTA CCTCCCAGGG TGATTTGCAC AGACGCCTTG AAAATAAGCA TATTCAAATG
ATTGCTCTTG GTGGAGCTGT GGGAACAGGG TTATTGATTG GATCTGGAGG AAGTTTAAGA
ACCGGTGGTC CAGCTGCCTT GTTGATCGCA TGGGGCTTGG TTGGTACAAT GGTCTTTTGC
ATTATCCATG CTCTAGGTGA ATTGTGTGTA GCTTTCCCAG TTAATGGGGC CTTTTCAACT
TATGCTACCA GATTCGTTGA TTCCAGTTGG GGGTTTGCTG TAGGCTGGAA CTATGCTCTT
ATGTGGTTGA TAGTGATGCC TCTTGAGTTG GTTGCTGCTG CCATGTGTAT TCTGTACTGG
AATTCTAGCA TCAATCCTGT AGCCTGGGTG GCTATTTTCT ACGTTTTAAT CATGGGAATC
AACTTGTTTG GAGTCAGAGG CTATGGCGAG GCCGAATTTT ACTTAACAAT CGTCAAAGTC
ATAGCTATTG TTGGGTTTGT TATACTTGGT GTAGTGTTAG TCTGTGGAGG TGGACCCAGC
AAGCAATTTA TTGGAGCTAA ATACTGGAAT GAACCGGGGG CTTTTGCACA TGGATTTAAA
GGTGTTGCTA CTACTTTCAT CACGGCTTCG TACTCGTTAG CAGGATCTGA AATGGTGGGT
TTGACTAGTG CAGAGGTAGA CAACCCCAGA AAGGTATTAC CAAAGGCAGT CAAGCAGGTT
TTCTGGAGAC TTTTCTTGTT TTACTTCTTG TCTTTGACAT TTGTTGGTTT GCTTGTTCCT
TACAATTCTC CAGATTTACT TGGAAGCGGT GGAACTTCTA CTTCTCCATT TGTCATTGCT
ATCAAGAACG GAGGTATTCA TACCCTTCCC TCTATCTTCA ACGCAGTTAT TTTGATCTCC
GTCATCTCTG TAGGTAACTC AGCTGTCTAT GGATGTTCCC GTACCATTCA GAGTTTAGGT
GCTCAAGGTT TAGGTCCTGA GATTCTTGGT TATGTTGACA GGAAGGGTAG ACCCTTGGCC
GGAATTGCAT TTTCTGGAGT ATTTGGGTTA CTCTGTTTCC TTTCAGCATA CAAAAACAAG
GATGAGGTTT TTGGATGGCT ATTGAGTGTC TCTGGTCTTG CAACGATCTT CCTGTGGTTC
AATATTGGCT TATGTCATAT TAGATTCAGA ATGGCTCTCA GAGCTCAAGG CATGTCTACA
GATGAATTGA TGTTTACTTC AATTGCCGGG GTATGGGGCT CTATCTATTC TATGGTGCTT
TTGATAGTTG TTCTAGGTGT GCAATTCTGG ACTGCATTGT TCCCCATTGG TAGCAATGGC
AAACCAAATG CAAAGAACTT CTTCCAGAAC TACTTGGGGT CTATCGTTAT TCTCATTTTC
TACTGCGGTC ACAAATTATG GACCAGAAAC TGGAGATTCT ACGTTAGTTT GAAGGATATT
GATTTGATAA CGGGAAGAAG AGATGTCGAT TTGGACGTCA TCAGAGCAGA AATCGAAGAT
GAGAAAAGAG TAAACAAGAC GAAGCCATTT TACATTCGTG TGTGGAACTA TTGGTGTTAA
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| Protein sequence | MKDKASSEKY STESDHSNEG VVPTQPTNTQ SSRWTGFKDS FKRVEIDNQT TYDLNDIERA
NAATSQGDLH RRLENKHIQM IALGGAVGTG LLIGSGGSLR TGGPAALLIA WGLVGTMVFC
IIHALGELCV AFPVNGAFST YATRFVDSSW GFAVGWNYAL MWLIVMPLEL VAAAMCISYW
NSSINPVAWV AIFYVLIMGI NLFGVRGYGE AEFYLTIVKV IAIVGFVILG VVLVCGGGPS
KQFIGAKYWN EPGAFAHGFK GVATTFITAS YSLAGSEMVG LTSAEVDNPR KVLPKAVKQV
FWRLFLFYFL SLTFVGLLVP YNSPDLLGSG GTSTSPFVIA IKNGGIHTLP SIFNAVILIS
VISVGNSAVY GCSRTIQSLG AQGLGPEILG YVDRKGRPLA GIAFSGVFGL LCFLSAYKNK
DEVFGWLLSV SGLATIFSWF NIGLCHIRFR MALRAQGMST DELMFTSIAG VWGSIYSMVL
LIVVLGVQFW TALFPIGSNG KPNAKNFFQN YLGSIVILIF YCGHKLWTRN WRFYVSLKDI
DLITGRRDVD LDVIRAEIED EKRVNKTKPF YIRVWNYWC
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