| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36975 |
|---|
| Symbol | |
|---|
| ID | 4840732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 511891 |
|---|
| End bp | 513816 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392047 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386117 |
|---|
| Protein GI | 150866493 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.113846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTTG TTCTAGCAGC GAGACCTCGG CTTCTCTATG TGTCCAGCAG ACAGCTCCAC
AGTTTCAACA AGCGGTTGCT CTCGAAGACT GTGTCCACCA AGCTCTTGAA GTCCACAATC
AGTCAAAGTC GATATATCAC ATCAAAGACG TCAAACACCG AATATGATAT ATTTGCAATT
GAAAACGGCA AAGAACCTGA AAACTACAAT CGCGTATCTA ACTCTACAAG TAACTCCACC
AATCACAACA ACAGCATTTC GAATAGCTCT ACCAATAATC GTAACAATTC CAATAATAGC
AATAAAAATC GCAACAATAG CTCCAATTAC ACCTCGTTCA AGGGACGTAA CGGTAGTGTT
GCTCTTGTTT CCGGCGTCAT CATCGTAGGC TCGTACATCA CCTTCTCTCT GTCTAACTAC
TACAACTTGG ATACGTTACC TTCTCATAAT GGCAACAATA ACGGCAATCC TCGTTTGTTG
ACAGCTGCTG CAAATGATGG TAAAAAGTAC TTCTCTACGT CGACGTCGTC CATGCACCAG
AAAAACAGTA TCAGCCAACA ACAACACAAA GAAGGTGTCT TTCTCCTCAA CGAAGAGCAG
GTTTCGGCTA AATTGAGACA GTTTGAAGAG TCCTACTTCG TCCATAGAGG AAGAGGAGTC
ACACGATACG ATATTTGCCA ATTGCCGTCA AATTCGCCAA TTGAAGATGA CCGTGCTGAA
GAGATTGTGC AAGTTCCAAT TCTACAAGAG AATAACATTA AGACCTCAAC AGACTGGATG
TTCTTTGGAG TCTTTGACGG TCATGGCGGC TGGACAACCA GTAGCAAACT CCGCGACCAG
TTGATCGGCT ATATAATCCA CGAATTGGGT ACTATCTTCA AGACAGCCAG CACTGAAGAA
AACTTACGCT ATGTGCCAAA CAGCGCTACT ATAGACCAGG CCATCAAGAA TGGTTTTTTG
AAGTTGGACC ACGAGTTGGT CAATAAGAAC ATCGAGAAGT TGTTGAATGA CAACAATAAA
GCAAAAGCGG CCGAGTTGTT GATGCCGGCC TTGCTGGGCT CGTGTGCTTT GCTTTCTTTC
TACGACACCA ACTCCAAGAC GTTGAAAGTA GCAGTAACAG GCGATTCCAG AGCCATATTG
GGTTCCTTTA AGGACAACCA ATGGACTGTT CGTCAATTGA GTATCGACCA GACAGGTTCT
AATCCCACAG AAGTAGCCCG TATCATTAGT GAGCATCCTG ATGAGTCCAA AGTAATTCGT
AATGGTAGGG TTTTAGGATC GTTGGAGCCC ACGCGTGCTT TTGGAGATTG TCGCTACAAA
CTTCCAGCAT CCATACAAGA AAGGATCTAC AAGCAGTTTT TTGGCAAAAG ATTGCCTAAT
CACTTGCAAT CACCACCGTA TGTTACGGCT GAGCCGGTGA TAACCACCAC CAAGATCAAT
CCCGAGAACA ACGACTTTCT TGTCATGGCT TCTGATGGAC TCTACGAAAT GTTGACCAAC
GAAGAGATTG TGGGCCTTGT AGTGAAATGG ATGGAAAAGG AGAAGGTGAT TAAGCCACAG
AAGTCGTTCT GGAACGTTTT TGGCTCTAAT GAGAATAAGT TGCCTGAAGT TTCAGACGTG
ACTAATGACA AATCGCTGAA GAAGCCGATT CGCAAGACTA AAGGATCCAA CGGAGCTTTT
CTTTTGGAAG ACAGAAACGT TTCTACGCAT TTGATCAGGA ACGCCCTATC AAATGGAGGC
TCGAAGGAAC AGACCACCAT GCTCATATCC ATTCCAAACC CAGTATCTAG ACGTTATAGA
GATGATTTGA CGGTGACAGT CGTTTTCTTT GGCGAAGATG TCCATGGCGA GAACGAGGCT
GGCAAGTTAG AGATCAATGC CAATGCCACC GCTGGTGGTA TCGATTCGTC CAAGCCCAAG
TTGTAG
|
|---|
| Protein sequence | MVFVLAARPR LLYVSSRQLH SFNKRLLSKT VSTKLLNISN SSTNNRNNSN NSNKNRNNSS
NYTSFKGRNG SVALVSGVII VGSYITFSSS NYYNLDTLPS HNGNNNGNPR LLTAAANDGK
KYFSTSTSSM HQKNSISQQQ HKEGVFLLNE EQVSAKLRQF EESYFVHRGR GVTRYDICQL
PSNSPIEDDR AEEIVQVPIL QENNIKTSTD WMFFGVFDGH GGWTTSSKLR DQLIGYIIHE
LGTIFKTAST EENLRYVPNS ATIDQAIKNG FLKLDHELVN KNIEKLLNDN NKAKAAELLM
PALSGSCALL SFYDTNSKTL KVAVTGDSRA ILGSFKDNQW TVRQLSIDQT GSNPTEVARI
ISEHPDESKV IRNGRVLGSL EPTRAFGDCR YKLPASIQER IYKQFFGKRL PNHLQSPPYV
TAEPVITTTK INPENNDFLV MASDGLYEML TNEEIVGLVV KWMEKEKVIK PQKSFWNVFG
SNENKLPEVS DVTNDKSSKK PIRKTKGSNG AFLLEDRNVS THLIRNALSN GGSKEQTTML
ISIPNPVSRR YRDDLTVTVV FFGEDVHGEN EAGKLEINAN ATAGGIDSSK PKL
|
|---|
| |