| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36953 |
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| Symbol | TSC10 |
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| ID | 4840658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 392416 |
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| End bp | 393402 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391973 |
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| Product | 3-ketosphinganine reductase |
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| Protein accession | XP_001386092 |
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| Protein GI | 150866472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.443636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.202257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGTTCA GTACTTCTAA TTTTCCCGTG TCCGGAAAAG TCGCCTTGAT AATAGGTGCA
TCCCAGGGAA TTGGAGCAGA CCTAGCACTT AAGCTCTACG AACGAGATTG TTCGTGTATT
CTCGTTGCAA GAACGGCCTC CAAACTCAAG CAGCAGATCG AGAGAATAGA GAAAAGTGTA
GGCAAAAAGG AAAATACCTC ATTGCTGTAT TTGGCACATG ACGTTTCTGA CTACGATCAA
TGTGTAGAAC TCTGGGATCA GATTGTAGAT TCTCACCATC AGGATCCAGA CGTTATTTTC
TGTTGTGCTG GATCTTCAGT ACCCAAATTA TTCAACGATT TGACTGGAGC CGAGATCCAG
TCTGGGATAA CCACCAACTA CAACACCGCC GTAAACGTTG TCCATGCCGG GTTTAAAAAG
GTTTTGGCTA CAAATCCCAA GCTTGCTTTC AACAAACATA AGCATAGACA TGTCATTTTG
TTTTCGTCCG TAGCCAGTTT CTACGGCTTC ATTGGCTATG CCCAGTATGC GCCCATGAAA
GCTGCGATTC AATCTCTTTC CATAGTGCTT CGTCAGGAAT TGGGACCTTA CAACTATCGA
GTTTCATGTG TCTTTCCTGG CAACTTTATG TCTGAAGGAT TCGTAGAAGA GCAAAAGACA
AAACCAGAGA TAACTATAAC AATTGAAGGA CCAAGTTCTC CTATTCCAGG TGAAGAATGT
GCCGAACTAA TTATAAACAA GCTCAGCAAG GGTTACGATA CCGTAACTAC GGACTTCATT
GGCTGGTTGT TGGGCTGTTC TGTCTTGGGA GTCTTGCCCA GAACATGGGG ATTATTCCAG
GTGATAGTGA GTTTTCTTTT CCTGATCTTT GCACCTTTGG CTAATTGGAT TGTATATCGA
GATATCATCA AGTATTTCAA GAAGAGACAG CTTGAAATAG AGTCAGAGGC TGTTGACGAA
GACGAAGAAA GCCATAAGAA GAAGTAG
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| Protein sequence | MWFSTSNFPV SGKVALIIGA SQGIGADLAL KLYERDCSCI LVARTASKLK QQIERIEKSV
GKKENTSLSY LAHDVSDYDQ CVELWDQIVD SHHQDPDVIF CCAGSSVPKL FNDLTGAEIQ
SGITTNYNTA VNVVHAGFKK VLATNPKLAF NKHKHRHVIL FSSVASFYGF IGYAQYAPMK
AAIQSLSIVL RQELGPYNYR VSCVFPGNFM SEGFVEEQKT KPEITITIEG PSSPIPGEEC
AELIINKLSK GYDTVTTDFI GWLLGCSVLG VLPRTWGLFQ VIVSFLFSIF APLANWIVYR
DIIKYFKKRQ LEIESEAVDE DEESHKKK
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