| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36928 |
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| Symbol | |
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| ID | 4840779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 249453 |
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| End bp | 250028 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640392094 |
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| Product | predicted protein |
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| Protein accession | XP_001386069 |
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| Protein GI | 126139093 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5249] Golgi protein involved in Golgi-to-ER retrieval |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000829707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.878601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATCG ACTTCTCTGC GAGCTGGATT CAGGAGAATC CAGCCTATCA ACAGTTTGTG
AAAGTTGAAG TAACGTACCA AAAGTTCTTG GATCAAGCTG TGCCACATAC AACCAATAGA
TGGATAGGAA CAGCCATTTT GCTTTCGTTG TTCTTGTTGC GGATATTTGT TTCTCAAGGA
TGGTATATCA TTTGCTATGC TTTAGGTATT TATCTTTTGA ACTTGTTTTT GGCGTTTTTG
ACTCCGAAAT TTGATCCTTC TTTAGAGCAA GAGCTTAGAA ATGAGTCCAT CGAAGAAGGA
GTTATAGAAG ACGAACCTAC CCAAGAGGAT GAAGAGTTCA GACCTTTTAT AAGAAGATTA
CCAGAGTTTA AGTTTTGGTA TAACGGTACA AGAGCTACAG TTCTTGCTTT GTTTCTTTCC
TTTTGGAGTA TATTCGATAT TCCCGTATTC TGGCCCATTT TGTTGATGTA TTTCATTATT
TTATTCACAT TGACAATGAG AAAACAAATT CAGCATATGA TCAAGTACAA GTATTTGCCT
TTCGATTTTG GCAAGACTCG ATACAGAAGA AATTGA
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| Protein sequence | MAIDFSASWI QENPAYQQFV KVEVTYQKFL DQAVPHTTNR WIGTAILLSL FLLRIFVSQG
WYIICYALGI YLLNLFLAFL TPKFDPSLEQ ELRNESIEEG VIEDEPTQED EEFRPFIRRL
PEFKFWYNGT RATVLALFLS FWSIFDIPVF WPILLMYFII LFTLTMRKQI QHMIKYKYLP
FDFGKTRYRR N
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