Gene PICST_36916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36916 
Symbol 
ID4840431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp188526 
End bp189350 
Gene Length825 bp 
Protein Length274 aa 
Translation table12 
GC content48% 
IMG OID640391746 
Productpredicted protein 
Protein accessionXP_001386248 
Protein GI150866598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0905779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAC AGTCCAAGGC CACCACGGTC TTAGAGAGAA CTTCACACTA CTTGAAGGTT 
GGAGTGTTGA AACAGAAGCC AGCCTGGTAT GATGTAGTAG GAGCCTTTCC TCCTCACACA
GATCTCACCA AGAAGCCGAA GGTTTTGGAG TTGAAAACAC AGAAACCAGA CCCATTCACA
TCGTTGTTCG GCACATCGAG AAATGATGGC ACGGTTAAGA CTCGTGCCAG TGCCTTTGAC
CGTTTGCAGA AGAATAACAG CATCCTGAGA ATCCCCCAGT TGGAGTTCTT GGAAGACGAG
TTGAGAGACG TATTCTACCA CCAGCACCCG TGGGAATTTT CGCGTCCCAA GACGTTGATC
GAAAACAAGG GTGACGAATA CAAGGACTGT GACTGGTCAC ATATGTTGCA GTTCAACAAG
CCGTTGGACG GTGAGTCTGT CGTGCAAAGA ACATTGTGGT TGTTGGCTGA TTCCAAGAAG
AACGGCCCAA AGTTGTCACT TTTCGAGGCC TACGACAAGG CCAGATTTGA ATTCTACCGC
TTGAGAATGC GAGAGGAAAT GAACAGCTCA GTATCCAGAG AAGAATCGGT TATGTACGGA
GCTGTTTTCC CTACTACCCA TCTTGAATGG GGTGTACAAA AGGAACAAGA ATACATCGAT
GTGTGGGCAA AGGTTGCCCT GGACAAGACC AAGGTAGCCC TGGCTAATAG AGGTAGAGGT
ACTTCTGCCG GCTCAGGTGC TGACGAAGAA AAGGGAGCCG AAACTTCAAT CTGGGAAAGC
AGTTTCGAGA TCTCTGATGC CGAAGAAGTT GTCGAAGAAA AGTAA
 
Protein sequence
MKIQSKATTV LERTSHYLKV GVLKQKPAWY DVVGAFPPHT DLTKKPKVLE LKTQKPDPFT 
SLFGTSRNDG TVKTRASAFD RLQKNNSISR IPQLEFLEDE LRDVFYHQHP WEFSRPKTLI
ENKGDEYKDC DWSHMLQFNK PLDGESVVQR TLWLLADSKK NGPKLSLFEA YDKARFEFYR
LRMREEMNSS VSREESVMYG AVFPTTHLEW GVQKEQEYID VWAKVASDKT KVASANRGRG
TSAGSGADEE KGAETSIWES SFEISDAEEV VEEK