Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36916 |
Symbol | |
ID | 4840431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 188526 |
End bp | 189350 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640391746 |
Product | predicted protein |
Protein accession | XP_001386248 |
Protein GI | 150866598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0905779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAC AGTCCAAGGC CACCACGGTC TTAGAGAGAA CTTCACACTA CTTGAAGGTT GGAGTGTTGA AACAGAAGCC AGCCTGGTAT GATGTAGTAG GAGCCTTTCC TCCTCACACA GATCTCACCA AGAAGCCGAA GGTTTTGGAG TTGAAAACAC AGAAACCAGA CCCATTCACA TCGTTGTTCG GCACATCGAG AAATGATGGC ACGGTTAAGA CTCGTGCCAG TGCCTTTGAC CGTTTGCAGA AGAATAACAG CATCCTGAGA ATCCCCCAGT TGGAGTTCTT GGAAGACGAG TTGAGAGACG TATTCTACCA CCAGCACCCG TGGGAATTTT CGCGTCCCAA GACGTTGATC GAAAACAAGG GTGACGAATA CAAGGACTGT GACTGGTCAC ATATGTTGCA GTTCAACAAG CCGTTGGACG GTGAGTCTGT CGTGCAAAGA ACATTGTGGT TGTTGGCTGA TTCCAAGAAG AACGGCCCAA AGTTGTCACT TTTCGAGGCC TACGACAAGG CCAGATTTGA ATTCTACCGC TTGAGAATGC GAGAGGAAAT GAACAGCTCA GTATCCAGAG AAGAATCGGT TATGTACGGA GCTGTTTTCC CTACTACCCA TCTTGAATGG GGTGTACAAA AGGAACAAGA ATACATCGAT GTGTGGGCAA AGGTTGCCCT GGACAAGACC AAGGTAGCCC TGGCTAATAG AGGTAGAGGT ACTTCTGCCG GCTCAGGTGC TGACGAAGAA AAGGGAGCCG AAACTTCAAT CTGGGAAAGC AGTTTCGAGA TCTCTGATGC CGAAGAAGTT GTCGAAGAAA AGTAA
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Protein sequence | MKIQSKATTV LERTSHYLKV GVLKQKPAWY DVVGAFPPHT DLTKKPKVLE LKTQKPDPFT SLFGTSRNDG TVKTRASAFD RLQKNNSISR IPQLEFLEDE LRDVFYHQHP WEFSRPKTLI ENKGDEYKDC DWSHMLQFNK PLDGESVVQR TLWLLADSKK NGPKLSLFEA YDKARFEFYR LRMREEMNSS VSREESVMYG AVFPTTHLEW GVQKEQEYID VWAKVASDKT KVASANRGRG TSAGSGADEE KGAETSIWES SFEISDAEEV VEEK
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