Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33600 |
Symbol | |
ID | 4840760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 1071670 |
End bp | 1072743 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392075 |
Product | predicted protein |
Protein accession | XP_001386398 |
Protein GI | 150866716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0247334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG AAGATAACTT TATCGACCCT AACAGCGAAG TTGGGAAGCA ATTGCAGAAA CTCAAAGATG AGTTCAAGCA AGAGCTATTG GTTCAAAGCG CCAAGTATGA CGCGTTGATG GAAGCTATGA AAGCTCAAAG CTCCTCTGGC GTACCTCCAC CCCAGATAAA CAAACTGGAG GATCGGAATG AAGAAATAAG GAAGGATGCG AAGAAAGATT CAGAGCTAGC AGCAACAGCC TTCAAAGGAA TTGTTCCGCT TGCGAGAAAT ATTGACGCTA TTACCAAATG GGAAAAAGCC TTCTTAAAAC TCTTCCGAAG ATACGGTGGC TTACAGAAAA TATGGGATGA AGACTTAGGA CATGATTCTA AAGACTTCAA TATTAAGAAC ATCCCATGGC GTGGGAAGGA ATTGGAAACA TTCATACACA GATTGTCCGA TGAATTGATA TCCAGAATAA TTGATATTAA TGAAAAGGCA TTCTCTGAGA TAGATGAAGT GAATTACGAA ACAGATTTAA AGACTATGTA CATCTTTGTA AAGACTTACA AGATGGAGAA CCTTCCACAT AGAATTGGAC AGGTATTGAC TTACCTTAGG TACACTGGAG ATTTTAGAAC GGATACCGAC AGAGCTGTCG ATGGCCTTCT GCACATAAAA CAATGGGTTG AAGGCACCAA CGAAGAAATC CTAGATTTCT TGTGCAAGAT GAAACTATAT TACATCATTG TATTTGATAG GTACCTAAAC GAAGTTGAAA CACGCAACAT GTTTTATAAA TCTCTTGCTT GGTTCTTTCA GGAACACAAA AAGGATGGTA AAACACCAAC AATTGATGAC GTTATTCAGC GCATGAGAAA TCATCACGAC TACGAGCCAC CAGACTCTCT GGACAAAAGA ACAATCGAAA GCTTGATAAG CGAAAGGATT AAAAACGCCC AAGAGAGAGA AAAGACCAAA TCCAATGGAA ATAGAGGAAA CTTTGCAAAA TCCCACACCA CAGGTGAATC ACACGATGGT AATAAGCTGG GATTCAAGAG CAAAACCTCC GGTGCCAAAC GCCACGGACA ATAA
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Protein sequence | MAKEDNFIDP NSEVGKQLQK LKDEFKQELL VQSAKYDALM EAMKAQSSSG VPPPQINKSE DRNEEIRKDA KKDSELAATA FKGIVPLARN IDAITKWEKA FLKLFRRYGG LQKIWDEDLG HDSKDFNIKN IPWRGKELET FIHRLSDELI SRIIDINEKA FSEIDEVNYE TDLKTMYIFV KTYKMENLPH RIGQVLTYLR YTGDFRTDTD RAVDGLSHIK QWVEGTNEEI LDFLCKMKLY YIIVFDRYLN EVETRNMFYK SLAWFFQEHK KDGKTPTIDD VIQRMRNHHD YEPPDSSDKR TIESLISERI KNAQEREKTK SNGNRGNFAK SHTTGESHDG NKSGFKSKTS GAKRHGQ
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