| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33594 |
|---|
| Symbol | |
|---|
| ID | 4840757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 1059319 |
|---|
| End bp | 1060602 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392072 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386208 |
|---|
| Protein GI | 150866565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.258342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA TCAGTTTCTC TCCAGATAGG AATGAACTGC CATTCACCCT CAAGCTTTAC
CCTAATTCCA AGACAGACTC TTCTCCCAAT TCTAACACAC TTGAATCTGC TAACGATTCC
GATTCCAAAA CTTCCTATCC TTGGCTGTCT GTCACAGAGG GAGCAGGTGA GCTGTCGCCT
GGTTTCATCA GAGGAGTGTT CAAACTCAAA AGAAGAGCAT CTACTACACT ATCTCCTCCT
CCTTCACCTC CACATATTGA GGAAAAGCTT GAAGAGCCTG AACCAGTGCA TTTGGAGTTG
TACAATAAGT TCAAACAAGA ACCATTAGGA ATTTCTTTTC CTGTAGTTAA CTATGATTCT
GTCGGTGATC CAGGTGGATT GGGTATCAAC TTTGACCACC CCAGTCTTGA CTTCGACATC
AAACTTCCAA AGTTCGAGCT GTCGTCTACG ATTCTTAGCA GTGCAGGAAC CCCACCATCC
TCCAAGACAC CCACAAAGCA AAAATCGTCT TCTCCTTTTG AAAGGGTCAA ACAGTTGCTT
TACAGAAACC ATTGGCTGCA CCATGATATG AACAAACAAA GTGCTGAGTT TTCTGTGGCT
TCTTCCGAGT TCAGGTCTCC TGTGAACATG AGGATTCCTG TTAAAGAAGA TTGGAAAACA
GGAGTTGGGG TGCCAATAGA CATCTCGATC TTTCAGAACA ACGGTTTTGG ATCTCCCATA
AGCGAACAAT GTGTACAAGA TAATAAGAGT ATCAAGTTCA AACAATACGT GGATATGCTA
GTTTACAACA ACAAATTTCC TTACAGTTCA TCTACATCCT CCGAGAAAAT AGATCGCTCC
TGTGCGAGTC CAGTGTCAAA CGATTCATAC CAAGACAACT CCAATTGGAG CAATGCCTGG
CCAAAGAAGA GACTTCGCAA GAGTAAATCT GCGCCATTCA AGCGCATGGT TCCATTAGAG
TCCAGCTATG AGGGACTGGA GAACCCTAGT ACTAGAAGAA AAAGATCGAT ATCGTTATCG
CTTACGAGAA GAACTATCAA GAACATCTCC AATATTCCCG AGACACCAGC AAGTCGTCCC
GTAAGCTCAA TATTGAAAAA CAAGATAAAC TCCAATTTCG ACATCGAGCG CCAAAACACG
GTTCGGGATG ATACCGTCAA TATAGAGGCA TTCTTGAAAA ACTTTGAGAG ATTCGAGATG
GAAAAATACG AGAAGGAATC GCAATTGGAA CACCTCCGCC ATCAGCAGAT CCAGCACTAC
TACGAAAACG AGGAATTTGC TTAG
|
|---|
| Protein sequence | MMNISFSPDR NESPFTLKLY PNSKTDSSPN SNTLESANDS DSKTSYPWSS VTEGAGESSP
GFIRGVFKLK RRASTTLSPP PSPPHIEEKL EEPEPVHLEL YNKFKQEPLG ISFPVVNYDS
VGDPGGLGIN FDHPSLDFDI KLPKFESSST ILSSAGTPPS SKTPTKQKSS SPFERVKQLL
YRNHWSHHDM NKQSAEFSVA SSEFRSPVNM RIPVKEDWKT GVGVPIDISI FQNNGFGSPI
SEQCVQDNKS IKFKQYVDML VYNNKFPYSS STSSEKIDRS CASPVSNDSY QDNSNWSNAW
PKKRLRKSKS APFKRMVPLE SSYEGSENPS TRRKRSISLS LTRRTIKNIS NIPETPASRP
VSSILKNKIN SNFDIERQNT VRDDTVNIEA FLKNFERFEM EKYEKESQLE HLRHQQIQHY
YENEEFA
|
|---|
| |