Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33591 |
Symbol | |
ID | 4840567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 1052484 |
End bp | 1053209 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391882 |
Product | predicted protein |
Protein accession | XP_001386392 |
Protein GI | 150866711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA AATTAGGTTG CGATGACTTG GAGATTCCAA CAGCTAAGAA AACACACACA AGCCAGTTGC CGGACGAATT GGACTTGATT TTCAGTGACA TGCTTCCAGC AGAGTCTTCT ATTTATTTAC TGTCATCAGA ACGACTTGCT ATCGATGCTG AGATCGACCA AGCGCTCTCT GGTTTCGATT TTTCGACTGT AGATCAACAG GAACAAATGT CAGAAAACCA AACTGAAACA TCAACCAAAG AGGAGTCCCA CGAGGAACTA GATACCCTTA TAACAGCTTC GAATGAGTCG AAGCCACAAT CTAGTAATGT GAGCTCGTCA CTGGAAAACT CTACACCTTT CGACTCACCT GAAACCATCA CCACTAGCAT TACATACAAC GAAGAAGACA TAAAGAAGCA CACCACAGAG ATCAACAAGG AAACGTTAGC ATCAATCAAA CACTCTATGG TCAACACTTC GAAAGTTATG TCGTTGTTCA CGACTTTAAA AGTGACATAC TTGAAGTTGT GTAAGGAGTT CAACTACTTG TTGCAGAAGT TCAACGAAAA CGAGAAGATC AAGATCGAGT TGATCAACGA AAATAATGAG TTGCGAAAAC TCTTGACTGA GATTATCACC AAACGCGAGC TCGAGAGGAA GAGAGCAAAG GAACTCGAAT CTAAGAATGG AGTCCTTGAG TTAAAGCTCA TGGAGAAGGA GCTCAAAACG AACTAA
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Protein sequence | MKHKLGCDDL EIPTAKKTHT SQLPDELDLI FSDMLPAESS IYLSSSERLA IDAEIDQALS GFDFSTVDQQ EQMSENQTET STKEESHEEL DTLITASNES KPQSSNVSSS SENSTPFDSP ETITTSITYN EEDIKKHTTE INKETLASIK HSMVNTSKVM SLFTTLKVTY LKLCKEFNYL LQKFNENEKI KIELINENNE LRKLLTEIIT KRELERKRAK ELESKNGVLE LKLMEKELKT N
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