| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33573 |
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| Symbol | |
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| ID | 4840503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 996148 |
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| End bp | 997128 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640391818 |
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| Product | predicted protein |
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| Protein accession | XP_001386204 |
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| Protein GI | 150866561 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5080] Rab GTPase interacting factor, Golgi membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCA ATTGGACCCA GCCGTCGTAT ACACCGGCAG ACGTAGACGA TTTTATTATC
GCCGATGACG ACGATGAAGG CTCTACCCAG CATGGCAGTA GTGGCAGAAA CGACTTAAAC
AGTACCAGTA ACGGGATCAA CGCAAGTAAT AATAACGGTA GCGGTGGAAG CAATATTTTC
TCGCAGTTTG GCTTGTTGCC CAAAGTCGAT TTATCACAGA CATTTGCCCC TTTCACAAAT
TCATCCAACT TACCGGGTAA CAATCGAGTC AGAGAAAGAC AGTACTCTGG GGGAGACACC
TTGGACGAGC CGGTATGGGC CACTTTGAAA CGTGACTTGC TCCAGATAGC TCGGAGATTG
GGCATTGTTA TCTGGCCCAT GCAATTGGCC AAGTTAGCCA AGCAGCAGCA GCTGCGTTTA
GTAGATTTCG CTGCCAGCAA TGGAATTACT CTTCCGCCGC TGATTACCAA CAATCGTAGA
ATCGACGTTA GCCATACCCC TGATGACGAG GAACAGGTAG CGGGCTTGGG CCTGAGTGTC
TTCGTCAAGC AGGACAACTT AGAGTGGGAC TTATGGGGAC CACTTATCTT TTCGTTGGTA
TTTTCGGTGA CCTTAGGTCT CGCTGCTCCC AAACTGGAGA CGAACCTGGT TTTTTCTGGT
TCTTTTTCTT TTGTGTGGAT TTTCTTCATA GTCATAGGCT TGAACATCCA GTTGTTGGGT
GGATCAATTT CGTTTATGTC AGCTATCAGT GCTGCTGGTT ACTCGATGTT TCCTATAGTT
GTAGGTGCTC TTCTCTCCTG CTTGGTGTTG AAATGGAAGC TTATCCGCCT TGCTCTCATG
CTCGTGCTAA ACGTTTGGTC TATCTATGCT GGTGTCTTGA GCTTGGAGTG TTCGGGTGTG
TTGCCCGGTA GAGTCACCCT AGCCATCTAT CCGGTTGCAC TTATGTACTC GATCATGAGT
TGGCTAGTGG TGATTACCTA G
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| Protein sequence | MSSNWTQPSY TPADVDDFII ADDDDEGSTQ HGSSGRNDLN STSNGINASN NNGSGGSNIF
SQFGLLPKVD LSQTFAPFTN SSNLPGNNRV RERQYSGGDT LDEPVWATLK RDLLQIARRL
GIVIWPMQLA KLAKQQQSRL VDFAASNGIT LPPSITNNRR IDVSHTPDDE EQVAGLGSSV
FVKQDNLEWD LWGPLIFSLV FSVTLGLAAP KSETNSVFSG SFSFVWIFFI VIGLNIQLLG
GSISFMSAIS AAGYSMFPIV VGALLSCLVL KWKLIRLALM LVLNVWSIYA GVLSLECSGV
LPGRVTLAIY PVALMYSIMS WLVVIT
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