Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33547 |
Symbol | |
ID | 4840493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 934449 |
End bp | 935258 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391808 |
Product | predicted protein |
Protein accession | XP_001386189 |
Protein GI | 150866550 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGCA CGGTAACAAA AAGCAGGAGC GTGGCTACGT GTGTGCGTGG CTTCGCATCC TCGGCAATTG CCTACAAGCC CAAAGATGCC CAACAGGAAG CCAAAAGGAA ATTGAGACGA GAACAAGCTG TGAAGCAGAG AAACAAACAG GCTCCAGAAT CACATCCCTT ATATATGACC GTGCCGCAGG CAATGAGATA TTTGAGAGCT GCTGAAGTAG GTCAACCAGC TAAGAAGACA ACTGTCTCCA TTCTTATGAC CGTTCTTCCA GAAAGAGGAT CCAAGCCTTT GGCAGGTTCC GTTTATTTCC CCAAACCTAT TAAGGAGAGT CATGTGATGA TATTCAGTTT ACAAGATGAA AAAGTTAAAA TAGCCAAAGA GTTGGGTGCT ACCCATGTTG GAGGGTTGGA CCTCATTGAG TCTATAAGCA AGGGTGAGAT CAAATTGGAC AAAATCACGC ATGCATTTGC AACCCCAGAG ATCGTCAAAG ACTTACGAGC TATAGCCAGA CAGATTGGAC CTAAAGGGTT GATGCCAGCA GCAAAAAAGG GCACTGTCTC TGAGGATATC GAGAGTTTGA TGCAGCTGAG TGTAGGTGCG TATCCTTTCA AGCAAAAGGA ACAACATTTA TCTATTCCAA TTGGCAGATG TGACTTCAGC GACGAAGAGA TCATCAAGAA CTTGAAGGCT GCTTCAGAGG CCATCTACGG CTTGCAACCT CCAGGAACTA GAAAGCCAAA CTTGATTGGC CAGACGTGTT TGAGCTCGAC TTTGGGGCCA TCTCTTGTCA TCAACTTCAA GAAGACTTGA
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Protein sequence | MLSTVTKSRS VATCVRGFAS SAIAYKPKDA QQEAKRKLRR EQAVKQRNKQ APESHPLYMT VPQAMRYLRA AEVGQPAKKT TVSILMTVLP ERGSKPLAGS VYFPKPIKES HVMIFSLQDE KVKIAKELGA THVGGLDLIE SISKGEIKLD KITHAFATPE IVKDLRAIAR QIGPKGLMPA AKKGTVSEDI ESLMQSSVGA YPFKQKEQHL SIPIGRCDFS DEEIIKNLKA ASEAIYGLQP PGTRKPNLIG QTCLSSTLGP SLVINFKKT
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