Gene PICST_33547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33547 
Symbol 
ID4840493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp934449 
End bp935258 
Gene Length810 bp 
Protein Length269 aa 
Translation table12 
GC content46% 
IMG OID640391808 
Productpredicted protein 
Protein accessionXP_001386189 
Protein GI150866550 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCA CGGTAACAAA AAGCAGGAGC GTGGCTACGT GTGTGCGTGG CTTCGCATCC 
TCGGCAATTG CCTACAAGCC CAAAGATGCC CAACAGGAAG CCAAAAGGAA ATTGAGACGA
GAACAAGCTG TGAAGCAGAG AAACAAACAG GCTCCAGAAT CACATCCCTT ATATATGACC
GTGCCGCAGG CAATGAGATA TTTGAGAGCT GCTGAAGTAG GTCAACCAGC TAAGAAGACA
ACTGTCTCCA TTCTTATGAC CGTTCTTCCA GAAAGAGGAT CCAAGCCTTT GGCAGGTTCC
GTTTATTTCC CCAAACCTAT TAAGGAGAGT CATGTGATGA TATTCAGTTT ACAAGATGAA
AAAGTTAAAA TAGCCAAAGA GTTGGGTGCT ACCCATGTTG GAGGGTTGGA CCTCATTGAG
TCTATAAGCA AGGGTGAGAT CAAATTGGAC AAAATCACGC ATGCATTTGC AACCCCAGAG
ATCGTCAAAG ACTTACGAGC TATAGCCAGA CAGATTGGAC CTAAAGGGTT GATGCCAGCA
GCAAAAAAGG GCACTGTCTC TGAGGATATC GAGAGTTTGA TGCAGCTGAG TGTAGGTGCG
TATCCTTTCA AGCAAAAGGA ACAACATTTA TCTATTCCAA TTGGCAGATG TGACTTCAGC
GACGAAGAGA TCATCAAGAA CTTGAAGGCT GCTTCAGAGG CCATCTACGG CTTGCAACCT
CCAGGAACTA GAAAGCCAAA CTTGATTGGC CAGACGTGTT TGAGCTCGAC TTTGGGGCCA
TCTCTTGTCA TCAACTTCAA GAAGACTTGA
 
Protein sequence
MLSTVTKSRS VATCVRGFAS SAIAYKPKDA QQEAKRKLRR EQAVKQRNKQ APESHPLYMT 
VPQAMRYLRA AEVGQPAKKT TVSILMTVLP ERGSKPLAGS VYFPKPIKES HVMIFSLQDE
KVKIAKELGA THVGGLDLIE SISKGEIKLD KITHAFATPE IVKDLRAIAR QIGPKGLMPA
AKKGTVSEDI ESLMQSSVGA YPFKQKEQHL SIPIGRCDFS DEEIIKNLKA ASEAIYGLQP
PGTRKPNLIG QTCLSSTLGP SLVINFKKT