Gene PICST_33523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33523 
Symbol 
ID4840664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp859633 
End bp860166 
Gene Length534 bp 
Protein Length177 aa 
Translation table12 
GC content50% 
IMG OID640391979 
Productpredicted protein 
Protein accessionXP_001386179 
Protein GI150866540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0759685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAA AACACATCGA CGACAGCGTC ACCAAGGCCC GAATCAACAT GGTCGACACG 
TCGAACCCCG ATTCGGCCAA GATCGAAGCA TCAATTAATA GACTCCACCA CCACAGCCAC
TGCAATAAGG AAAAGGTTGA GAAATTAGGT GCAAAACAGG TCAGACACAG GAGAAGACGT
CTCAGCCAAA CCGTCGCAGA AGCCTCGTCC CAGGTCAAAC CAAACCCCGA CACCATCCCC
AGAACCATCT CTAGTGTCTC TCCAACCCTC TCGAGCTCCA GCACTTCTGG CTGTGGAAGC
GGTAGGGAAA TCTCGTTAGA AGATGGGACA AAAGTGTGTC GCAACTGCCC TGACTGCGAC
AAGAAAAAGA CACCAGTGGA AGAACTGCAC TTCCCCAAGG TCAACATCGA GGTCCAGGAA
GCTTCGACTC CTATGGCAGA ATTGCAACGT GAAACAGAGA AGTTGTCGCT CGATACCACT
AATAGCATCA ACAGTATCCA CACCACGGAA ATCGACTTCA CAAACGTTTT CTAA
 
Protein sequence
MYAKHIDDSV TKARINMVDT SNPDSAKIEA SINRLHHHSH CNKEKVEKLG AKQVRHRRRR 
LSQTVAEASS QVKPNPDTIP RTISSVSPTL SSSSTSGCGS GREISLEDGT KVCRNCPDCD
KKKTPVEESH FPKVNIEVQE ASTPMAELQR ETEKLSLDTT NSINSIHTTE IDFTNVF