Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33523 |
Symbol | |
ID | 4840664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 859633 |
End bp | 860166 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 12 |
GC content | 50% |
IMG OID | 640391979 |
Product | predicted protein |
Protein accession | XP_001386179 |
Protein GI | 150866540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0759685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAA AACACATCGA CGACAGCGTC ACCAAGGCCC GAATCAACAT GGTCGACACG TCGAACCCCG ATTCGGCCAA GATCGAAGCA TCAATTAATA GACTCCACCA CCACAGCCAC TGCAATAAGG AAAAGGTTGA GAAATTAGGT GCAAAACAGG TCAGACACAG GAGAAGACGT CTCAGCCAAA CCGTCGCAGA AGCCTCGTCC CAGGTCAAAC CAAACCCCGA CACCATCCCC AGAACCATCT CTAGTGTCTC TCCAACCCTC TCGAGCTCCA GCACTTCTGG CTGTGGAAGC GGTAGGGAAA TCTCGTTAGA AGATGGGACA AAAGTGTGTC GCAACTGCCC TGACTGCGAC AAGAAAAAGA CACCAGTGGA AGAACTGCAC TTCCCCAAGG TCAACATCGA GGTCCAGGAA GCTTCGACTC CTATGGCAGA ATTGCAACGT GAAACAGAGA AGTTGTCGCT CGATACCACT AATAGCATCA ACAGTATCCA CACCACGGAA ATCGACTTCA CAAACGTTTT CTAA
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Protein sequence | MYAKHIDDSV TKARINMVDT SNPDSAKIEA SINRLHHHSH CNKEKVEKLG AKQVRHRRRR LSQTVAEASS QVKPNPDTIP RTISSVSPTL SSSSTSGCGS GREISLEDGT KVCRNCPDCD KKKTPVEESH FPKVNIEVQE ASTPMAELQR ETEKLSLDTT NSINSIHTTE IDFTNVF
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