Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33517 |
Symbol | IFG3 |
ID | 4840640 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 846915 |
End bp | 848100 |
Gene Length | 1186 bp |
Protein Length | 348 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391955 |
Product | D-aspartate oxidase |
Protein accession | XP_001386174 |
Protein GI | 150866535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAT ACGTGATAGT AGGGTGAGTA TATTGAAAAT AGTGGGTCAA TTTTGAATTT TTCAGAATTT TTCACTTATC TGGCTCTATG CATATGAATT AGTGAACAAA TTAGATAGAG TCACATTCAC CGATCTTGAA GATGAAACTA ATAAAATTCT AGTTCAGGGA TCATTGGGCT CTATACGGCC TACAATCTTC TTTTAAGAGG AGTTTCTCCA AGAGAAATCA CTATCGTTGC CGAACATCTT CCTGGGGATG AACTGATCAA CTACACTTCT CCATATGCTG GAGGAAACTT CTCGTGTATC ACAGATGATG ACCCAAAGAC TTTGTTCTAT GACAAGCACA CGTACACGAA CTTGAGTAGA CTCCAAAAAG AATTGGGAGG TGCTCCATGC GGCTTGGACA GATATATTTC TACTGAATAT TGGGATACCA AGCCTTCTAA GGAGAAAATC GAATCATTAG CTTCCTATTT ACAAGAATAC GAAATCATTG ATCAAATGAA CCTTCCCATG GGTGTAGCCT ATGGGATAAA GTTCAGATCG TGGAACTTCA ATTGTCCCAA GTTTTTATTG AACTTCCAGA AATATCTTCA AGAAAAGGGT ATTAGATTTA TCAAACGCAA GTTGACTCAC ATCACCCAAG CCTATCTCAC TTCTTCAACC AAAACTGTTT TCAATTGTAC TGGAATTGGA GCCCATAAAC TCGGAGGAGT CAATGACACA AACGTATATC CCACTAGAGG GCAAGTTGTC GTCATCAAAG CACCTCATAT AGTTGAAAAC GTCATGAGAT GGGGAGAAGA CTATGCTACC TACATCATCA AAAGACCCTA CTCCAAAGAC CAATTAATTC TCGGAGGATA CATGCAGAAA GACAACTGGA CCGCCGATAC ATACAAGCAC GAGACGGAGG ATATTCTCAA GAGAACTACG GAGTTGTTTC CCAAGATTTT GGCCGATAAC CCTTATGGTA ATGATTTGAA GGATTTGGAA ATCTTGAGAG TTGTGTCCGG TTTGAGACCA AGCCGGTACG GAGGAGTTCG TATTGAAAAG TCTCTTGTTG AACACAACAA GTACTTGGTT CATAACTACG GAGCCAGTGG ATACGGATAC CAGGCTGGAC TAGGTATGGG CTACGAAGCT GTGAGATTAG CATTGGCTAG AGACAATAAC CTTTAG
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Protein sequence | MTKYVIVGSG IIGLYTAYNL LLRGVSPREI TIVAEHLPGD ESINYTSPYA GGNFSCITDD DPKTLFYDKH TYTNLSRLQK ELGGAPCGLD RYISTEYWDT KPSKEKIESL ASYLQEYEII DQMNLPMGVA YGIKFRSWNF NCPKFLLNFQ KYLQEKGIRF IKRKLTHITQ AYLTSSTKTV FNCTGIGAHK LGGVNDTNVY PTRGQVVVIK APHIVENVMR WGEDYATYII KRPYSKDQLI LGGYMQKDNW TADTYKHETE DILKRTTELF PKILADNPYG NDLKDLEILR VVSGLRPSRY GGVRIEKSLV EHNKYLVHNY GASGYGYQAG LGMGYEAVRL ALARDNNL
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