Gene PICST_33494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33494 
SymbolCYC3 
ID4840627 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp784032 
End bp784889 
Gene Length858 bp 
Protein Length252 aa 
Translation table12 
GC content45% 
IMG OID640391942 
Productholocytochrome-c synthase 
Protein accessionXP_001386161 
Protein GI150866524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0169467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGT TTTGGGCTGA GAAAAAGGTT TCCACCTCCA TCGAATCCGC AGTTGACAGT 
TTTCCACAAC TGAATCTTGA TGCAAAATGC CCTATAGACC ATACTAAATT GTCTCAAAGA
CAACAGGAAA AACCACTGGG CTGCCCAGTT GACCACGGGT CTTTCAAGAA AGCCCCTGCA
GCCGAATGTC CTGTTAAGGG AGGAGATGAG GTACTTAATC CTTTGAATAA CATGCCTATG
GCTATCTCAT CGGAAAGACT TCCGGGTCAG AAAGTGAGTC TTTCAACCGA AAGAACAATT
TCCACTATTC CAAGAGGTGA ATCTGATGAT CAGGGCTTAT GGGAGTATCC ATCTCCACAA
CAAATGTTGA ACGCTATGGT CAGAAAAGGC AAGGCTAAGG ATATCCCGGA AGACGCAGTA
GAGTCCATGG TTGACGTTCA TAACTTCTTG AACGAAGGAG CATGGCAACA GATCTTAGAT
TGGGAAGATG AGTATACAAA AGAAACAAAG ATTGAACCTC GTTTGAAGAA ATTTACAGGT
AGACCTAACG ACTTGTCTCC CAGAGCTCAA ATGTACTTGT GGCTAGGTAA ATTGTTTCCT
GACACTTTCA ACACTCAACC TCCTTTCGAT AGACACGATT GGACAGTGTT GAGGTCGATG
GGCTTGAACA AAGGCTTCAA GGAAGTCAGA TACGTCATTG ATTATTACTC TGCTCCAGAC
GATGAGGAAA CGGGTATGCC CGCATTCATG TTGGATACTA GGCCAGCTTT AGATAGTCCA
GCAAGTGTAA GGGACAGATT CGTCCATTGG TCGTATCCCT TGTACAAAAG GGCCATGGGC
GAATTTGACG AGAAGTGA
 
Protein sequence
MGWFWAEKKE KPSGCPVDHG SFKKAPAAEC PVKGGDEVLN PLNNMPMAIS SERLPGQKVS 
LSTERTISTI PRGESDDQGL WEYPSPQQML NAMVRKGKAK DIPEDAVESM VDVHNFLNEG
AWQQILDWED EYTKETKIEP RLKKFTGRPN DLSPRAQMYL WLGKLFPDTF NTQPPFDRHD
WTVLRSMGLN KGFKEVRYVI DYYSAPDDEE TGMPAFMLDT RPALDSPASV RDRFVHWSYP
LYKRAMGEFD EK