| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33477 |
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| Symbol | RIB2 |
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| ID | 4840702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 737974 |
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| End bp | 739731 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392017 |
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| Product | DRAP deaminase |
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| Protein accession | XP_001386154 |
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| Protein GI | 126139263 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.261571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA GAGTCGAAGT TTCCCAAGAC AAAGGAGTTA AAAGACCGGC ATCTCCATCT
CCTGCTGCTC AGGATTCAAA GCTCAGGGAT AGTCAGGGCT TCAGAATGAA GCGCCAAGTA
ATTGACAAAG TTACCTTGAC GGCATATGAG CAACTAGGAG GAGAGGATGC TTCTGATAGC
ACCATTCAGC AAGGAAAGAC GATCGAGGAA GAAGAAGCAG AAGGTGCTAG CTACATCATC
GATGGTAGAT TGAGAAGAGT ACATCCATAC TATTTTACCT ATTTGACATA TTGCAAGATG
AGATGGAGGG ACAGAAAACT CTTGGATATA TTTGTAGACG AATTTAGAGA TCGCTCGGCT
GAATACTACA AGAAAGCCAT TGATGCTGGA CAAGTAACGT TGAATAAAAA GCCAGCTAAC
TTGGACAGTA TAGTGAGAAA TGGAGATCTC ATCAGTCATC GTACTTATAG AAAAGAGCCC
CCAGTTTCAT CGCGTGAAAT CAAAATTGTG TATGAGGATG ACGATTTAAT TGCAATTGAT
AAACCTTCAG GTATTCCAGT GCATCCTACG GGGAGGTATC GGTACAATAC TATCACCAAG
ATTTTCCAGC ACGAAATGGG CAAAGTGGTA CACCCCTGTA ACAGACTTGA TAGACTCACT
AGTGGTTTGA TGTTTCTTGG AAAAACCGCT AAAGGGGCAG ACAAATTGGT CAAACAGATC
AGAGAAAGAA GCGTAAGAAA GGAGTACATT GCTAGAGTGA AGGGAGAATT TCCCTTGGAA
GAAGTTGAAG TCGACCAGCC TATGAGAACC ATTGCTCATA AGCTAGGCTT GAACAGAATT
GACTTGAAAG AAGGCAAAGA TGCTAAAACT GCTTTCAAAC GGGTTTCTTA TGATCCAGAA
CACGATACTT CGATTGTCAA GTGTATTCCA TTAACTGGTA GAACTCACCA AATTCGTGTA
CACTTACAAT ACCTTGGGCA TCCTATTGCC AACGACCCTA TCTACTCGAA CAAGTTCGTA
TGGGGAAATA ATTTGGGAAA AGACAACGAA GGTGACTCCA ATGAAATAAT ACAACGTTTA
GATAGAATTG GTAAAGACAA GGCCGCCTCT TCTTGGGCCC ATCCCGAGGA AGATGGAGAG
TTAATTACTG ATGAAATTGA TGAAATCTCT GGAATGCCAG TTTATTCCGA TCCTGGTCCC
AATGACTTGG ACTTGTGGTT GCATGCCTAT AAATATGAAG CAGCAGACAA GTCGTGGTCG
TACAAGACTG AGTATCCTGA ATGGGCAATT GGACCACACA GAAAGTTCAT GGAATTATCA
CTAGAAATGG CCAATAAGTG CGACGAAACG CAAACTCAAT ACAATGTAGG TGCTGTTTTG
GTCAACAGAG GCAAGGTTCT TGCTACAGGC CACTCTAGAG AACTTCCAGG AAACACCCAT
GCAGAACAGT GTGCTTTAGA AAAGTATTTC GAAGAGACTG GAAAGAGAGA AATACCGAAA
GGAACAGAGA TATATACTAC GATGGAACCA TGTACTCTTC GATTAAGTGG AAATATTCCC
TGTGCCGATC GTATAATTGG TACCACTATC AAGACCTGTT TTGTAGGAAT AGTCGAGCCA
GACACTTTTG TCAAGAACAA TTCATGTTCT GCTAAGTTTG CTGAAAATGG GATAGAGTAT
ATTCATATTC CTGGCTATGA AGAGGAATGT TTAAAGATTG CTACAAAGGG CCACGAGAAG
TTAAGCAAAG ACTCATAA
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| Protein sequence | MSERVEVSQD KGVKRPASPS PAAQDSKLRD SQGFRMKRQV IDKVTLTAYE QLGGEDASDS
TIQQGKTIEE EEAEGASYII DGRLRRVHPY YFTYLTYCKM RWRDRKLLDI FVDEFRDRSA
EYYKKAIDAG QVTLNKKPAN LDSIVRNGDL ISHRTYRKEP PVSSREIKIV YEDDDLIAID
KPSGIPVHPT GRYRYNTITK IFQHEMGKVV HPCNRLDRLT SGLMFLGKTA KGADKLVKQI
RERSVRKEYI ARVKGEFPLE EVEVDQPMRT IAHKLGLNRI DLKEGKDAKT AFKRVSYDPE
HDTSIVKCIP LTGRTHQIRV HLQYLGHPIA NDPIYSNKFV WGNNLGKDNE GDSNEIIQRL
DRIGKDKAAS SWAHPEEDGE LITDEIDEIS GMPVYSDPGP NDLDLWLHAY KYEAADKSWS
YKTEYPEWAI GPHRKFMELS LEMANKCDET QTQYNVGAVL VNRGKVLATG HSRELPGNTH
AEQCALEKYF EETGKREIPK GTEIYTTMEP CTLRLSGNIP CADRIIGTTI KTCFVGIVEP
DTFVKNNSCS AKFAENGIEY IHIPGYEEEC LKIATKGHEK LSKDS
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