| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33476 |
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| Symbol | |
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| ID | 4840790 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 735541 |
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| End bp | 737679 |
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| Gene Length | 2139 bp |
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| Protein Length | 530 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640392105 |
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| Product | predicted protein |
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| Protein accession | XP_001386153 |
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| Protein GI | 150866518 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5188] Splicing factor 3a, subunit 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.50882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.174506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGT TGCAACGTAA TGTTGGTGTG TCTTGTTCTT TATGAATCTC ACAGGCGATA
TCAGCAACAG GATGGTGTAA ATATATACGA GATACCGTTG ATCTGAGAAT GTTAGGCTTG
ATGTCAATGA CTTGTGAAAG GCTGATAATG AGATGAGGAA TGAAAATCCA ATAAATCTTC
CTATGATTTT GTATCAATTG CTGTACAAAG GGGCCGTAAT TGACAAAAAG ACTCCATATA
TAGATTTCCT ATACTGAATC AACTATTTGT ATAGTTCAAT TATACTTGTG ATTTCAAAAT
TATAGTACTT GAAACTTGGG GATCGAGTGC TTATTTACAG TTATAGAATA TAGCGGTGCG
ATTGAACAAG TAGACAGAAT TAGCGAGAGA TAAAAAAAAT AGGGCGGTGC GGCTATTAAA
TCAGATGACT TCAATCACGC AGCTTTCTGC ATCTATATCG AGATGCCCCA GACATGTCTT
ACCCATAATC TCCAACTTTA TAGCAGACCA TCCGGTTAAA TACTTTAAGA ATAGTAATAC
ACTATAAGAA TGTGGCTGTT TCTTGAACTG CAGCGGTCGA TTCTTGAAGA GCTCGATGTA
ATCGAACTTG AATCCTCGCG TAGGTTCAGA AAAGATCCTC TATTGTATCC ACAGAATGAG
AATAAAGAAA AGCTACAGAT TGTCAGAACA AAGAGACCAC AGAAAGAAGT CAAGTTGCAG
CAGCATGAAT TGGCTGTTTT CCAACAGAAA TACAAGAAAC ATTGCAATTC ACTTAGAAAC
CATACGGCTA ACGATAGCGA CATAATACAA TCAATCCTTG GTACCCTAGA TGATTCCAAA
GCTACGTTTT CCAATTTTGA TTCTGCTCTA GCCCAAATTC AAGAGAAGCA TAACAAGACC
AATAATGGTG AAATTGAAGT GGCGGAGAGC ATACGCAATA TGTATACTAT GTTTTCCAGT
ATTCTCTTTT CTGGGGAAGA ATCTGTATTG CTAGATGATG ATATAAAGAG AGTAAGAAAA
GAAGGCAAAG AAAAGACAAA AGTCAAGAGA AAGCACATCA TCAGCATCAC TGCATCCCAT
CTTGATCCAG ATGGAATATA CTCTACTGAA GAAGTATATG GAAAATATTT GGATTTGACA
AAATTCCACG AGATCTACAG AAATCAGACT TCCAGCAACG TCTCGTATTT GGAGTACTTG
AAAGTGTTCG ATATCTTTCC ATACGCAGAA AGCTTCCGCA GTTCAAGCAT ATATCTACAG
TACTTGAGAG ATCTAAGTGA ATATTTGGTA GACTTCGTAC TGAGAACAGA GCCATTGCAG
AACTTCAATG AAGTGTTTGA ATCTATTAAG AAATCATATT CTCCTAAAGA AGAACCAGCA
ACTAGAGATG GAGTAGAAAA TGAACTGGGT GAAGTGTATT GTAGTGTTTG TCAAAAGGTC
TTTGCAAAGA TATCAGTTTA TCAAGGCCAT TTAAATGGTA AGAAACACAA GAAGAATGCT
AAAGAATTGC AAACTGCAAC ACCAAAAGAG TCAATCATTT CTGAGAGTGA CTTGCAAGAG
CATATTAATA CAGAATTGGG TAAGTTCCTC TCCAACTATA AAGAGGCAAC TATACAGAAT
ACAGAGAGAA AATCAGCCAT GACTGAAAGA GAAAGATTGA TAGAGAATAC CACGATCGTC
GGAGACGAAT CTGACTATAC GACTGTATAT GATTCAAGTT CAGATAGTGG AAATGATTCC
AGCGATGAAG AAGAAAACGA GAACTTAAAA CACCTACCTT TAGGAGCCGA TGGAAAGCCA
ATTCCATTTT GGCTCTATAA ACTTCAGGGG TTGCACAAGA CTTACAACTG TGAAATATGT
GGCAATGTTA CATACAAAGG CAGAGTCACT TTTGAAAAAC ACTTTAGTGC ACCTAAGCAT
CAATATGGCT TGAAATGTCT TGGAATAACT GAGCAATTTG TGTCCTACTT TAAGGATATA
ATACTGATTA ACGAAGCACA AGATCTCTGG AAAAGATTGA AAAGAGATAA AAGAATCAAG
GAAGGAGACA TCGAGAATGC TGTGGAAGTC GAAGACGCCG AAGGTAATGT CATGTCAGAG
AAGGATTACC TTGATTTGAA GAAACAAGGT CTATTATAG
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| Protein sequence | MEMLQRNVAR SILEELDVIE LESSRRFRKD PLLYPQNENK EKLQIVRTKR PQKEVKLQQH
ELAVFQQKYK KHCNSLRNHT ANDSDIIQSI LGTLDDSKAT FSNFDSALAQ IQEKHNKTNN
GEIEVAESIR NMYTMFSSIL FSGEESVLLD DDIKRVRKEG KEKTKVKRKH IISITASHLD
PDGIYSTEEV YGKYLDLTKF HEIYRNQTSS NVSYLEYLKV FDIFPYAESF RSSSIYLQYL
RDLSEYLVDF VSRTEPLQNF NEVFESIKKS YSPKEEPATR DGVENESGEV YCSVCQKVFA
KISVYQGHLN GKKHKKNAKE LQTATPKESI ISESDLQEHI NTELGKFLSN YKEATIQNTE
RKSAMTERER LIENTTIVGD ESDYTTVYDS SSDSGNDSSD EEENENLKHL PLGADGKPIP
FWLYKLQGLH KTYNCEICGN VTYKGRVTFE KHFSAPKHQY GLKCLGITEQ FVSYFKDIIS
INEAQDLWKR LKRDKRIKEG DIENAVEVED AEGNVMSEKD YLDLKKQGLL
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