Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33473 |
Symbol | |
ID | 4840788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 731201 |
End bp | 731848 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392103 |
Product | predicted protein |
Protein accession | XP_001386152 |
Protein GI | 126139259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.191098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.13999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCG TAACAATTCA AGAAGACAAG CAATTTGTCC AGACCTATAT CCAGCTCATT GGACTTTCAG AGAATGCTCC GCTAGACAAG TTCAATTCCA CTACAGACTA TAACAAACTA GAATCGTTGG GTCCAAGTTT ACCACGATTC AAGGTTCCAT TTCCAGTCGC TAGCAGTGGA GCAATCTCAG AACAGACCAT TTCTTTAAAG TTCAAGTCAA TCAAGCCTCC TTTCAGATTC ACTGTAGATA GTTCGGCTGT TCCAACATCT TCTACTATAT TTAAGATCAA GACTGATTTA ATCGAATCTG TTCCTATATT GAAGGAAGCT GGTGTGACAC CTGCCAACTT GAAGTTGATG TTGAAATCTA AAGTTGTGCA CGACTCGTCC GCTCTTTCAT CATTGCCTAA TGTAGAATCT GAAGTTACTT TCAATGTCAT GGTGTCAGCT CCAGACGCTT CAAAGACTGT ACCTGTTGCT GAACCCGTAA CTGCACCTGT AGTTGAGACT GTTGCAGACA CGAAAGAGAT AAATCCATTG CAGATCACAG AGTCCACTTG GAACAAGATA TCTGATATTC TCAAGGAAGA TCTTGGAGAA GAAAGAGGAG GGCAAGCATT GGACAAGCTC AAGACCAACT GGAAGTAG
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Protein sequence | MSVVTIQEDK QFVQTYIQLI GLSENAPLDK FNSTTDYNKL ESLGPSLPRF KVPFPVASSG AISEQTISLK FKSIKPPFRF TVDSSAVPTS STIFKIKTDL IESVPILKEA GVTPANLKLM LKSKVVHDSS ALSSLPNVES EVTFNVMVSA PDASKTVPVA EPVTAPVVET VADTKEINPL QITESTWNKI SDILKEDLGE ERGGQALDKL KTNWK
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