Gene PICST_33473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33473 
Symbol 
ID4840788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp731201 
End bp731848 
Gene Length648 bp 
Protein Length215 aa 
Translation table12 
GC content42% 
IMG OID640392103 
Productpredicted protein 
Protein accessionXP_001386152 
Protein GI126139259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.191098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.13999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCG TAACAATTCA AGAAGACAAG CAATTTGTCC AGACCTATAT CCAGCTCATT 
GGACTTTCAG AGAATGCTCC GCTAGACAAG TTCAATTCCA CTACAGACTA TAACAAACTA
GAATCGTTGG GTCCAAGTTT ACCACGATTC AAGGTTCCAT TTCCAGTCGC TAGCAGTGGA
GCAATCTCAG AACAGACCAT TTCTTTAAAG TTCAAGTCAA TCAAGCCTCC TTTCAGATTC
ACTGTAGATA GTTCGGCTGT TCCAACATCT TCTACTATAT TTAAGATCAA GACTGATTTA
ATCGAATCTG TTCCTATATT GAAGGAAGCT GGTGTGACAC CTGCCAACTT GAAGTTGATG
TTGAAATCTA AAGTTGTGCA CGACTCGTCC GCTCTTTCAT CATTGCCTAA TGTAGAATCT
GAAGTTACTT TCAATGTCAT GGTGTCAGCT CCAGACGCTT CAAAGACTGT ACCTGTTGCT
GAACCCGTAA CTGCACCTGT AGTTGAGACT GTTGCAGACA CGAAAGAGAT AAATCCATTG
CAGATCACAG AGTCCACTTG GAACAAGATA TCTGATATTC TCAAGGAAGA TCTTGGAGAA
GAAAGAGGAG GGCAAGCATT GGACAAGCTC AAGACCAACT GGAAGTAG
 
Protein sequence
MSVVTIQEDK QFVQTYIQLI GLSENAPLDK FNSTTDYNKL ESLGPSLPRF KVPFPVASSG 
AISEQTISLK FKSIKPPFRF TVDSSAVPTS STIFKIKTDL IESVPILKEA GVTPANLKLM
LKSKVVHDSS ALSSLPNVES EVTFNVMVSA PDASKTVPVA EPVTAPVVET VADTKEINPL
QITESTWNKI SDILKEDLGE ERGGQALDKL KTNWK