| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33458 |
|---|
| Symbol | |
|---|
| ID | 4840695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 693506 |
|---|
| End bp | 695365 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640392010 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386326 |
|---|
| Protein GI | 150866658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGAC GCACGGCTCC TCTATTTTCA CGACTGGGAG TATATGTGCG ACGTTTTGTG
TATTCGTCTC CTCAAATAAC GAAAACTGTA GGTCCAATAT TGGAGCCTCT TCCAGTAAGT
GAGAAGAAGT ATGAGGCCAA GTATGAACGA TTGCAAACTG TATTTACTTT GCTTAAAAGT
AAAAAGACTC TTTCACTGAG TGTGGCACGT ATAAATCAAA TCTACTTGAA GTCTGGTCGG
ACCTTCGTGG AAGATTTGTT GGAGATCCCA GGAACAAACA TCTATCCATT CTTGTTTCAT
TACTATAAGC ATTCGTCATC CATACGGACT TTATTGCTTG ATGGACTTGT CAAGTTGATA
ATAGAGGGTA AAATTGATTC TGCAGTAGAA CTTATCGACC ACATGAGAGT AGGTAAAATC
ATCCCAGTCC AAGCCAGTGT GATTTTGTTC AATATCCATC TTAACAAGAG CTCTCAAGAT
ACCAGTAAGA GAAGACAAGA ATTAGGCAAA CTTTTGATAT GGCAGACGGT TCTGACTGGA
GATGTTCTTG CAGCAGCGTC GTATTTAATT CAGTTTGCCG AAGCCGAAAT AAGTGTAGAT
CCAGAAGTTG TGAAGATAGT TTTGAGATCT ATAGCCGTGC ATCATGATTC AAACTATTTG
TATTGTTGTC ATGCTATCCA CAGATTACTT GATGTTTATG GGGCAACCGT ATTATCCTCT
GCAGATTCAT TACTGGCACT AGAGATGCTT CAGCAAAAGC CACAGGCTCT TTTCTATGCA
AATTGGTTTT TCCAGAGAAT ACCGAAGCTA GAAGAACTCT TTCAGTCCAA CCCTCACAAG
TTTCTCAAAT TATTAAACGG TTTGATTCAA TTCAATATTG AAAATGGTCT TTACGAAGTG
GCATTGAACA TGTGGATTTC TACCAAAAGA TTCCAGAGCA AGTACTTGGT TCCAGACCAA
ATCGAATCAT TAGCCAAGCT CTTGAAAGAT CTGCCAAATT TGAAGTCTTT AGACAGCTTA
GTAGAACAGA TTCCCAAATA TGCCACTGAA AGTCAAGTCA TCGTCGATGT CTTATTGGAA
AAGTATGGAA CTTCTAAAGA ATCGATTTCC AAATTTGAAA CTCTTCTCAA AACAGTCAGA
GCTCCATTAA GGAGACTGAC CTTAACAGCA TTGTTCAAAG CATATGTTTT CCAAGAAAAT
GAGCCAGTTG CAGAAAAAAT TCTTCTGAAT CTTCTCAAGT CGAAAGATGG GGCTACGGCT
ACCGAAATAA ATGCTGTCTT TGCAAAGTTA TTGAGACAAG GCAAATTACA GGAAAGTATC
GATATGATCT TATCCACAGA TATCCACATA GCCAAGATTG CCTACGTGAC TATATTTAAA
GAAGTGGTCA AGAAAAGGTC TAAAACGGAA CAAGAAGAGA ATTTTTTGAA GACAATGTGC
AAGAGACTCA TGTTAGTTCC CAGAGATGAT GAGGTATTTG AGTTGCTCAC TGTGGAGATT
GTACGATACT ATTCAACTCA TATCAGCAAC CGGGCAGCGA AAAAGATATT CATAAACATC
GACAAGTTCA CAGCAAAGTC ACTGATTGCC GTAGACAAAC AGAACATCAA GTTTAATTTC
GTAAAAGTAG GAATACCGAA CAGGTTCAGA GAGTTGTTGG TTCTTTTACC TCTGAGCAAA
CTTCAGTGTC TTGATGTGAT TACGAAAAGA GCACTTCAGG AAGAAGATGC AAGCACCATA
GTTTGGGCTG TAGATGAGTA CCGCTACCAG AACCTAGAGA TCAAAGATGT CCTTCAACAT
ATACAGAAGA TGGACGAGAA CAAGTTTCTC AACAGCATAA TACGAGACGA TATCATGTAA
|
|---|
| Protein sequence | MLRRTAPLFS RSGVYVRRFV YSSPQITKTV GPILEPLPVS EKKYEAKYER LQTVFTLLKS
KKTLSSSVAR INQIYLKSGR TFVEDLLEIP GTNIYPFLFH YYKHSSSIRT LLLDGLVKLI
IEGKIDSAVE LIDHMRVGKI IPVQASVILF NIHLNKSSQD TSKRRQELGK LLIWQTVSTG
DVLAAASYLI QFAEAEISVD PEVVKIVLRS IAVHHDSNYL YCCHAIHRLL DVYGATVLSS
ADSLSALEML QQKPQALFYA NWFFQRIPKL EELFQSNPHK FLKLLNGLIQ FNIENGLYEV
ALNMWISTKR FQSKYLVPDQ IESLAKLLKD SPNLKSLDSL VEQIPKYATE SQVIVDVLLE
KYGTSKESIS KFETLLKTVR APLRRSTLTA LFKAYVFQEN EPVAEKILSN LLKSKDGATA
TEINAVFAKL LRQGKLQESI DMILSTDIHI AKIAYVTIFK EVVKKRSKTE QEENFLKTMC
KRLMLVPRDD EVFELLTVEI VRYYSTHISN RAAKKIFINI DKFTAKSSIA VDKQNIKFNF
VKVGIPNRFR ELLVLLPSSK LQCLDVITKR ALQEEDASTI VWAVDEYRYQ NLEIKDVLQH
IQKMDENKFL NSIIRDDIM
|
|---|
| |