Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33452 |
Symbol | |
ID | 4840613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 676529 |
End bp | 677959 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391928 |
Product | Uncharacterized conserved protein |
Protein accession | XP_001386144 |
Protein GI | 150866514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.242751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCAG ACTCCAAGCC CAATGCAATT GAATTGCACG TGCCGACTTT GCTCGACACA ATATTCAAAG ACAATGTTCA AGAGCTACTT CCCCCACACA GCATTAAAGC TCCCGAATAC ACAGAAATAC TTCTTCAGAA GACAACCAAA GCCAACAAGT ATTACGGATC TTTCCAACGG TATACACGGC AATTCATACC AGATGATTCA GCAGCAAACA CGGCCATTGT GCGATGGACC AATTCGTCTA TAGAGTCTAC ACAAAGACTC ATAATAGATT CGTGGATAGG CTCAGATTAC AAAGGAAATC AGGTCAGAAC CGAAAATCTG CCACATCAGA ATGTTCAGAC GAAAACTACT GCAAATTCAT TATTCTCATG GTCCTCTGGT GATGCTTACA TTGAACAGAG AAAGAAAGAA CTTCAGTTAG CCAAGGGCAA GGAAAAGAGT AGAAAGGAGA ACCAGAAAAC ACATAGTCAT CAAAAAGAAG TTCTGCCCGA GGAGACAGCA TCTAATAATG TTACAGAATC AGAAAGCAAG AGGGAAGCAC AAGAGAAGAG ACTCAAGAAG TTGAATCTCA CGGTTCCGAA AGAGTCTATT ACCAACAGAC TTAATCGTAT TATAGAGAAA GAATCCAATA CCTTCATTCA TGCCCGTATC CAGCGTATTA AGACACATCA CACCGAGCAG ATCACAAAGC AGATCCATGA GAGAAAGAGA AAAGACCACG AATTGTACTT GAAGAAGTTA CGACTCAAGG AAGAAGAATA CGACAAAGCA TTAAAGGCAG CAACCACAGA AACACAGAAA CAGGGATTTT TCGGTAACTT GTTTGGATTC AATTCGACAA CTACGAATTC TCGTTCAGAA TTGGATTTTC AACTCAAAGA TTCATTTGAT AACGAATCAG TTGCTAGCCA TACATCAACT ACAGCATCTA AGACGAACAA CAGTAATAGC AAGAGATTTT CGTTTCTTCC TGTAGGAGGG CTCTGGAGCT CTGGTTCTGG AGGGAAAGAG CTGAACAAGA ATGACTTGTC TGAAGTTTCT CCTAGTAAGA AAAGTGAATC TTCTAATGAT CATATACATC CTGCCGAAGT TGTCCTTCGC GAGGAAATCG AATTACAAGA AGAAAATGAA GTAGCAGAAA TAGAAGAGAA AGAAGAAGTA CACGAAGGTG AAAATGAAAA TGGGTATGAC TTTGATGATG AAGAATTCGA CGATTTCACA TCGGCAGAAC CATTGCCTAA AACTTCAACT ACCATAACAG CAATGGCTCC TTTAAAACCA TCTACTTTTC TGCCTCCTCC TAGTTCTACA ACGAATGAAT TCAATCTCAC TACTCAACAC AACATCAACG CGGACCTTTT GGACATATTT GGTCCTGAAA AGAAGAGTAA CGAAGCTAAC GAAAATCTAC TCAATATATA A
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Protein sequence | MDSDSKPNAI ELHVPTLLDT IFKDNVQELL PPHSIKAPEY TEILLQKTTK ANKYYGSFQR YTRQFIPDDS AANTAIVRWT NSSIESTQRL IIDSWIGSDY KGNQVRTENS PHQNVQTKTT ANSLFSWSSG DAYIEQRKKE LQLAKGKEKS RKENQKTHSH QKEVSPEETA SNNVTESESK REAQEKRLKK LNLTVPKESI TNRLNRIIEK ESNTFIHARI QRIKTHHTEQ ITKQIHERKR KDHELYLKKL RLKEEEYDKA LKAATTETQK QGFFGNLFGF NSTTTNSRSE LDFQLKDSFD NESVASHTST TASKTNNSNS KRFSFLPVGG LWSSGSGGKE SNKNDLSEVS PSKKSESSND HIHPAEVVLR EEIELQEENE VAEIEEKEEV HEGENENGYD FDDEEFDDFT SAEPLPKTST TITAMAPLKP STFSPPPSST TNEFNLTTQH NINADLLDIF GPEKKSNEAN ENLLNI
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