| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33443 |
|---|
| Symbol | |
|---|
| ID | 4840610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 658513 |
|---|
| End bp | 659826 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640391925 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386320 |
|---|
| Protein GI | 150866653 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5273] Uncharacterized protein containing DHHC-type Zn finger |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.137532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0676408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGCC ATCAGAGTCC GATATGGCTG CGCGTGGTCA AAATCGGAGT TCCTATAGGC
GTAATATTTG GTCTAGCATA CATTGACTTT GCTTCTTTTT ACTCTTTGGG ATACCAGGAA
ATCTACAAAC ACCATTCTAA GGGTATAGCC GTTGCATTAT GGGTACTTGG AGGATTTTCA
CAGTTTGTAA TGTTTTTGTA TTGGATTCTC ATGTTTGTCA TTGGTCCAGG AAAGTCTCCT
GTTTTCCAGC CACTCAACTT GTACGGAACA GATGATCCTA ATTTGATACC ATGTCCAGAT
ATATTTCCCT GCGATGAGTA TGGATACCCA GAATATAATT CCAATGCCAG ATCGATAGTG
ACTGCTCGAA CGTTTTATCT GAAAGATATG GGATATATGG TATTGAAGTT TGACCACTTT
TGTCTCTGGA TAGGCACTGT CGTAGGTGAA ACTAACTACT TGTTCTTCAT GAAGTATTGC
CAGTGGTTTC TAACGTATTT CGTTGTAATA TTAATTTTTT TAATCAGGTA TACACCCCTG
AACATTGGTC GTGGAGGTGA GATCAATCAC AACTTCATCC CGCTATACGT GATGTGTGGA
ATGTGGATCT TGATGATTGG AGCTCTCTTT GGAACTCATT TCTACTACAT TGTGATTAAC
AAAGTGACCC TAGACCAGGT CTCCGAGAAC CAAAAAAGAT CATTTGAAAG ATGGCAGAAT
AGCCACAAGG ACGATAAGAA GAAAAGACCC AAACCTAGAG AGGAGACTGG ATGGAGATAT
ATTAATGTCA AGAAAGACAA CTTGAGGTTA GTTGTACAGT ATGGAATTAA TGATAGAGTG
TATGACATGG GTGCAAAAAA GAACTTCATC AATTTGGTAT ACAATGGAAA TCGTAACCAC
GGTCTAGAGG AGCTGTTTTA TACCACTCAA AAGTATTTTG TTGCTCTTGC AATCTTATTC
ATTCCGTTTG TTGATATCTA CAATGGTTTC AAATATGCAA AAAGACCTCC TATAGACCCA
GAAATCGGTT CACTTCAAGA ACGAAAACGC ATGGAGTTTG AAAGCTATTC TTGTAAACTT
AATGACGATT TTCTCCAGCA CGTATATGGA AAAATCGAAA GAAAGGAATG TTACATAGCC
CAGTATATAA GACTTCCACA GGAACATCAG AAACCACCGG AAGACGAAAG AGAGCCACAA
AAGGAAGCAT CAACGGAGAT TAAATCAGAG ACCAAATCTG AAACAGGCTC CGAAATGGTG
TCTCCTTTGA AGAATAGTAC AGAGTCAGGT TCTCCTAGAT CTTCACAGCA ATAG
|
|---|
| Protein sequence | MTGHQSPIWS RVVKIGVPIG VIFGLAYIDF ASFYSLGYQE IYKHHSKGIA VALWVLGGFS
QFVMFLYWIL MFVIGPGKSP VFQPLNLYGT DDPNLIPCPD IFPCDEYGYP EYNSNARSIV
TARTFYSKDM GYMVLKFDHF CLWIGTVVGE TNYLFFMKYC QWFLTYFVVI LIFLIRYTPS
NIGRGGEINH NFIPLYVMCG MWILMIGALF GTHFYYIVIN KVTLDQVSEN QKRSFERWQN
SHKDDKKKRP KPREETGWRY INVKKDNLRL VVQYGINDRV YDMGAKKNFI NLVYNGNRNH
GLEESFYTTQ KYFVALAILF IPFVDIYNGF KYAKRPPIDP EIGSLQERKR MEFESYSCKL
NDDFLQHVYG KIERKECYIA QYIRLPQEHQ KPPEDEREPQ KEASTEIKSE TKSETGSEMV
SPLKNSTESG SPRSSQQ
|
|---|
| |