| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33431 |
|---|
| Symbol | HMC4 |
|---|
| ID | 4840448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 635382 |
|---|
| End bp | 636530 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391763 |
|---|
| Product | hypothetical multicopy protein |
|---|
| Protein accession | XP_001386131 |
|---|
| Protein GI | 150866503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.613875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACT TATCTACAAA TGTTTTGTCG GCTGGTAGAT CGGCACCGCC AGAAAGTCAC
GGCTCCAAAA CTCTTACTGT AGATAATATC GCAGAATTGA TTAAGATACA ATTAGAGGAT
TATGAAGCTA AGTTTCTAAA GCTTTATGCT CAACAGCAAT CTCAAGTTAA TGAACTTATA
CTGATTATAT TAACCAAGAA GAGCGATTCT GAGAAAGATA CCGGTGATTC CGCCATTACG
AGTACTGATA GTGATATTAA TCTTATTACG AGTATTGAGT CCAGTTCTGT GCTTGCTGGT
AAAGACATTA CTGAAAACAC CAGTGTTCCA CCTAAAATTG AAACCTTTCC ATCGCTTAGA
ACAAGTCAAA CCACTGCTCT AGATGGATTC GATTTTTTTG AGCGAACTCA AAGGGTGATT
AGAAAATCTC AGAAACATAT TCATGAATAT TGGAAAAAAT TACCCCCGCT CAATGAGACC
AGCGCTGAAC TCTGGTCCAG GGCTATTCAG GATTTGAACA ACGAGATGGA TTATAGAGCC
TTATCTAAAG CCAATTTCAA AGTCGACTGG AACACTTTCC AATCCAAAAC CGGACTCCGT
GGTGATAAAT TAGAATATTT TTACGAGTGC TGGAAGGATG CTCTTATTGG ACGTTATCGC
AATAACACTT TGCGTATCCT TGCTGTCAAT CGAGACCATA TTATTACTCT TGAAGATCTA
CTTGAGTACA CATCGCAAAA TGCAGACTAC GACAAAACCA ATTCTATACT TGAGGAAGTG
CAAAGACGCC GCCGAATCAA TCCAATGTGT CAAGACTATA TCTCAGAATT TAGAGGTACA
AACATTCATG ATTATGACCG TATAATTCAA TTTCTTAACG GCCATCCCGC CGATCTCTAT
TGTGCCATTA GTCACTTCTG TAACCAAAAA CATGAAGGCA ATCGTACTAT TGCTGCCGCT
ACGGTCAACT TCTATTATCA GGATTTTATG ACCAAGGACA ATTTTCAATA CCCTTCAGTC
AACGCTTTTG AAAAGAAAAT GAAAAGTACA CTTGGTTACT CTTGTAAATT TTATTCTGAT
TCATCTAAAT TAAGAACGAA TTCAAAACAC AGAAGGGGTA AGAGTAATAG TAATCATTAT
TCACAATAA
|
|---|
| Protein sequence | MSNLSTNVLS AGRSAPPESH GSKTLTVDNI AELIKIQLED YEAKFLKLYA QQQSQVNELI
SIILTKKSDS EKDTGDSAIT STDSDINLIT SIESSSVLAG KDITENTSVP PKIETFPSLR
TSQTTALDGF DFFERTQRVI RKSQKHIHEY WKKLPPLNET SAELWSRAIQ DLNNEMDYRA
LSKANFKVDW NTFQSKTGLR GDKLEYFYEC WKDALIGRYR NNTLRILAVN RDHIITLEDL
LEYTSQNADY DKTNSILEEV QRRRRINPMC QDYISEFRGT NIHDYDRIIQ FLNGHPADLY
CAISHFCNQK HEGNRTIAAA TVNFYYQDFM TKDNFQYPSV NAFEKKMKST LGYSCKFYSD
SSKLRTNSKH RRGKSNSNHY SQ
|
|---|
| |