Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33418 |
Symbol | |
ID | 4840441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 589050 |
End bp | 590234 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391756 |
Product | predicted protein |
Protein accession | XP_001386308 |
Protein GI | 150866642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.265783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTA TACGACGACT CCTTTCTACT TCCAATTGGA AACCACCAGA GTCATATTTT TCTCATTCTC CACTTAACTA TGAGTCGTAC TCAAGAAGAT TGAAAGGTGC AATCCACTAC ATCGCTCAGA ATGGAAGATT CACGGAAAGT ATTCTTATAG ATTGTATCAG AGCCAATAGA CAGTTACAAC AGCAGAACTG GAATTCGAGC CCAATAATCC AGAAGACAAG ATCCAGAAAC GACTTTCTCA ATCTCAAATT GAGTCCCAGC AATAGTACAC TTGAAGATGA ACTATTCAGT TTTGTATTCA ACAGACACCA AGAACGTTCG TCGAGTCCTG AAATTGTCCG CTCATATCTA ATTACTGAAC CTCTCCCTTC CAATACTGCG CGAGTTATAG ACGTAGGAGT GAAAGGGTTT GAATACAGTT TTTTGAAGCA GAAAGTTGAA CCTTCATTGG TTTTCACAGC TTTGCGGTTG TTGTTAGACA GAAAAGATTA CCAAAATAGT TTCAAATTGA TAGACTCTAC ATTCAACTGC GACGCCTACA AGGAGCTACA AAGACATCAA ATTGGTAGAA ACTTGTTTGG TTGGTTTCTG TACATTGCAG TAGCAACTGT AGTACAAGCA ATATTATTTC CTTTGGTTTC AATATTGGCC CTCTTCTCGG TGAATACAGC AACTGCTGGC ATTTTGATGT ACGGACTTCT AAGGTTAGAC ACGGCTGAAA ATTTGGGTAG AATCAGCTGG AGACCCTACG TCTCAATGCT CTACAAATTT ACACATCGCG ATGAATTGCT TGCAATAAAT ACTGTTATCA CTCATTTCGA AGAACATAAC GAAGTGAATA TCAAAAACTA CCACCACAGC CGAGTTCGCA AGCTCTCTAA CCTAAAGTTG TTTGACCAGG ACGAGTATGT TTTGGAGCTA CCTAACGACA GTGTAGAACT CGCATCTGTA GAGTATAGTG GACAGACATT CCAAGAGGAA AAGGGTATAG TTGAACTTCA GCAGTACTTC AAACACGAGT TGAACAGCCG GAAGATGGTC TTCAACGATT TGCCGGAGGA GTTGATTTTC CTCGAGTTCT GGTTTACCCA CGGTGAAAAT TTCGAGTGGG TAGAGCCAGA TCAGGATCCG GCAGAGATCA TAAAGTTAGA TATCCAAAAC CAGAAAACCG ATTAA
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Protein sequence | MTIIRRLLST SNWKPPESYF SHSPLNYESY SRRLKGAIHY IAQNGRFTES ILIDCIRANR QLQQQNWNSS PIIQKTRSRN DFLNLKLSPS NSTLEDELFS FVFNRHQERS SSPEIVRSYL ITEPLPSNTA RVIDVGVKGF EYSFLKQKVE PSLVFTALRL LLDRKDYQNS FKLIDSTFNC DAYKELQRHQ IGRNLFGWFS YIAVATVVQA ILFPLVSILA LFSVNTATAG ILMYGLLRLD TAENLGRISW RPYVSMLYKF THRDELLAIN TVITHFEEHN EVNIKNYHHS RVRKLSNLKL FDQDEYVLEL PNDSVELASV EYSGQTFQEE KGIVELQQYF KHELNSRKMV FNDLPEELIF LEFWFTHGEN FEWVEPDQDP AEIIKLDIQN QKTD
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