Gene PICST_33386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33386 
Symbol 
ID4840726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp477351 
End bp477875 
Gene Length525 bp 
Protein Length174 aa 
Translation table12 
GC content37% 
IMG OID640392041 
Productpredicted protein 
Protein accessionXP_001386293 
Protein GI150866629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.330096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00339265 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGTTTC ATGTACTCCT ATATCTTATT TTAAATTTCT GTTTGGTCAA CGCTGTTATG 
ACGACTTCTT ATTCTAAAGC AATAGGCTTG TTCACAAGTG GAACAGCGTC TTTTGCAAAG
AATTCTGGGG TGATCAGAGT AGGTTCTAGA GATGCGCCTC GTGATGGTAT TAATCCGTAT
TTCGTTCCTT TGAATTTCTA CCTGTTTGAC AACTATTCTA AGTTGAAAGC GATTTCTAGT
ATACTAAATG CTGCTGTTGA AGCTGGAGCT ACCGGTGACA TATTGTATTT GTACAATTAC
ATTGCTTTTA ATGGTGAAGA AGGGAATGTG GCCTTAACAA ATTATACTTC AAACTTCAAA
GATGAAGTTT GCCTATTTTT GAAGACATAC GAAGCTAATT CAACATTAGA ATTATCAGAA
ACTACAGCGG ACAAGAAGCT ATCTACGTAT TATAAGAATT TCCCAGTTGG AGATTGCGGA
GGGGATGTCG GTGGAGATTT CAGTTCTCAT GGATATAAGA CTTAA
 
Protein sequence
MMFHVLLYLI LNFCLVNAVM TTSYSKAIGL FTSGTASFAK NSGVIRVGSR DAPRDGINPY 
FVPLNFYSFD NYSKLKAISS ILNAAVEAGA TGDILYLYNY IAFNGEEGNV ALTNYTSNFK
DEVCLFLKTY EANSTLELSE TTADKKLSTY YKNFPVGDCG GDVGGDFSSH GYKT