Gene PICST_33361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33361 
Symbol 
ID4840677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp421661 
End bp422887 
Gene Length1227 bp 
Protein Length408 aa 
Translation table12 
GC content44% 
IMG OID640391992 
Productprotein serine/threonine kinase activity 
Protein accessionXP_001386096 
Protein GI150866476 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.814262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC CCGAACTATC CCCTGTTAGA CATCCTATCG ATGTTCGCAG CTTAACCTCC 
TATTTGCACT CCCTTACCCC AGAATCCAAG GGTACCACCT TAGGAGTCAA TGTCCCCGAC
TTCCTGAAGT ACAAAAAGCT CGATATTCAG CAGTTTAAGT TCGGCCAGTC CAACCCAACG
TATCTCCTCA CTGATGTCGA CACCGGGAGG CAGTTTGTGT TGAGAAAGAA GCCTCTGCCC
AATGCTAAGC TTGTATCCAA GTCTGCACAT GCAGTCGAGA GAGAGTTTTT CATGTTGAGA
AGCATTGGGC TTTTGAACCG TGATCCAGAG TCCAAGGGCA ACGTGCCTGT TCCCGAAGTC
TATTTGTTGT GTGAAGATGA GTCCATTATT GGCTATGTGT TTTATCTCAT GGAGTATATC
AACGGGATCC AAATCAAGAA TCCAGAAATG ATCGGAGTTT CTCCAGAAGA CAAGAAGTTA
TATTGGAAGT CGATTGTCGA AACTATCAGT GCCATCCACT TACTTGATAC CACGAAGTTG
ATCGCCGAGT TGCCTCCTAG TCACTATCCA CAATTCCAGA ATTTAGACAA GTTGAAGAAA
TCAACTTACT TCCAGCGTCA GGTTAGAACC TTAAGTGGAA TTGCAAACTT GCAAAACAAG
GTAGTCGATC CTATTCCAAG CTTCCAAGAG AACTGTGAAT GGCTCCTAAG AAGAGCTCCC
AAGGATCCCG CCAAGTTGAC GTTGATCCAC GGAGACTTGA AGATTGACAA TGTTCTTTTC
GATCCAAAGA AGAAGGTCGT CATCGGAGTC TTGGATTGGG AATTGTGCAC CATTGGACAT
CCTCTTTTCG ATTTAGCCAA CTTCTTGCAA CCGTTCCAAT TACCAAACCA ATTGAATAAG
AAGATGTCCG GTTCAGATAC CACAATTGGA TCTGAAAATC AAGACTCCAT AGACTTTATT
TACAAGGTTC TTGGTGACTA CTCTAAGAAA GTTACCTGGG ACCCACAAGA TCCATCCAAT
AACCCAATAG ATCACTGGCT CTTGGGTTAC GTATTCGGAT TGTTGCGTTT GTGTGTTATC
ACTCAAGGAA TTGCCATGAG ATCAAAGCAA GGAAATGCTA GTTCAGGTAA TGCTGCAGCA
TACGGTAGCT TCTATCCATT CTTGGCAGAT CTTGCTATCA AAGGTATTGA AGAATACGAA
GCCAGAAGAA GATCCAGCAA ATTCTGA
 
Protein sequence
MSAPELSPVR HPIDVRSLTS YLHSLTPESK GTTLGVNVPD FSKYKKLDIQ QFKFGQSNPT 
YLLTDVDTGR QFVLRKKPSP NAKLVSKSAH AVEREFFMLR SIGLLNRDPE SKGNVPVPEV
YLLCEDESII GYVFYLMEYI NGIQIKNPEM IGVSPEDKKL YWKSIVETIS AIHLLDTTKL
IAELPPSHYP QFQNLDKLKK STYFQRQVRT LSGIANLQNK VVDPIPSFQE NCEWLLRRAP
KDPAKLTLIH GDLKIDNVLF DPKKKVVIGV LDWELCTIGH PLFDLANFLQ PFQLPNQLNK
KMSGSDTTIG SENQDSIDFI YKVLGDYSKK VTWDPQDPSN NPIDHWLLGY VFGLLRLCVI
TQGIAMRSKQ GNASSGNAAA YGSFYPFLAD LAIKGIEEYE ARRRSSKF