| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33327 |
|---|
| Symbol | |
|---|
| ID | 4840647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 342632 |
|---|
| End bp | 343246 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640391962 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386268 |
|---|
| Protein GI | 150866613 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.573681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCTG TAGAAGACAC TCTTCAGGAT GATGATCCCT CGGTAGACGA ATTGGAATCC
CTTCTCCTGG CTATCACAGA ACAAGTTAAA ACTGAGTTAG ATGGATTAGG TGGAAATGAG
TTTGATGGAG AGAACGGAAA CGAGTTTGAT TTAGAGGATG GAGAGAATGA GAATGAAGCA
GATTATGAAA ATGAATATAC TGAGCAGGAT GAAATTATAG ACAATAGTAA GAAGACGCTC
GATTTCGGCT TTGAAGGAGG TGAATTCGAA GACTTTCCAG ATTTCGTGAT GCAAGAGATA
TACAAGCAAG AGAAGAAGAT ACCGAAGAGG AAGACTGAAA ATTCCGGTAC CAGTAAGTCA
ACAAACAATT TACCAACTAA AGCTAGCGAT ATTTTGTCCA GGTACAATAA CGACTCCGAT
TACACTTCAG ACGGTTCCGA TTGGGATATC GTTGAAAGCG ATTCAGACAA ATATGATAAT
GAACTAGAAC TTATAAACGA TGAGGACAAG ATCATCGATG TAGATAGTTC TCTGGATGTT
GAAGTTCAGG ATGATGAACA GGAAATGAAG TATATACCTG AAAAGTACGA TCGACTGCTT
GATGTAAGCA GATAA
|
|---|
| Protein sequence | MHAVEDTLQD DDPSVDELES LLSAITEQVK TELDGLGGNE FDGENGNEFD LEDGENENEA
DYENEYTEQD EIIDNSKKTL DFGFEGGEFE DFPDFVMQEI YKQEKKIPKR KTENSGTSKS
TNNLPTKASD ILSRYNNDSD YTSDGSDWDI VESDSDKYDN ELELINDEDK IIDVDSSSDV
EVQDDEQEMK YIPEKYDRSL DVSR
|
|---|
| |