Gene PICST_33279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33279 
Symbol 
ID4840434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp204660 
End bp205625 
Gene Length966 bp 
Protein Length321 aa 
Translation table12 
GC content42% 
IMG OID640391749 
Productpredicted protein 
Protein accessionXP_001386055 
Protein GI150866449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.236513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCC AAGACATCAC TAGCCAATCT TCAAGTTCAC ACAAAGTGTC CGAGGGCTCT 
TTTTCCAGCA AGCGCAAGCT AGACGAAGAA AACTCTAACG AAAGCTCGAC GGGAGTCGTC
TTTTACAGTG CTGGAAACAA AACTTCTGAA GAACCTCAAG TAAAGCGGCC CAAGTATTTG
GCAGAACACA AGCATCGCCA TGACTTTTTT GCAAGATTAA CTGTCAATGT CGATGAGTTC
ATAGCATCTC ATGATGTTTG GACTGCTTTC TTACAGGATG TACATTCTCA CCGTCTACAG
TCAACTACAC CTGCAAAGAA ATCCAGGAGA GTTACATTCG CTGACTCGCC GGTTTACGTT
GACAGACCCT TCAAGAAGTT AGGCTCTACG TGTGAATTCA ATTACAACGA ATTAGAGATA
GAGACTTATA GTGGAGTCTT CTTTGATGAG ATTCCACCAG TGGCACCTCT TCGGACTCCT
GGTAGACTTG AAGGATATGA TAAAGTTGGA GTTGTGTTCA GAAAGCTTCT GAAAATTGAA
ATTGGGAAAG CTGTTCAACA CAGCCGTCCT CAGTTCTTGT TTGACATGCT AGGTATCGAG
CAACCCTTCA CATATGTGCA AAACCCATTA TTCGGAAGCT TTCGTTCGGA ACCTCAATAC
TATCGTCTTG ATTCAGACGG CGAGGAAAAT GGGATGTGCC CTTACTGCTA TGACATTGTG
TTTCTACCAA AAGAAGAATA CACGAAGCAC ATATGTGATT GTCATGGAAT TGACCGTAAC
GGAAATCCCA TTACAGTCCC GTCATATATG GGCAGATACA AAAGTCATGA CAGAGAACAT
GCGAAGCTTT ACGAAGAGAG AGTTCCTTGT CTTCATTGCA AAGAGCTAAT TGAAGTCAAT
AGATTAACTC GTTTGTTTCC ACTCGAGAAT TACTACATTC ACTGTCGTGA AAAGCATTGG
AAATAG
 
Protein sequence
MFIQDITSQS SSSHKVSEGS FSSKRKLDEE NSNESSTGVV FYSAGNKTSE EPQVKRPKYL 
AEHKHRHDFF ARLTVNVDEF IASHDVWTAF LQDVHSHRLQ STTPAKKSRR VTFADSPVYV
DRPFKKLGST CEFNYNELEI ETYSGVFFDE IPPVAPLRTP GRLEGYDKVG VVFRKLSKIE
IGKAVQHSRP QFLFDMLGIE QPFTYVQNPL FGSFRSEPQY YRLDSDGEEN GMCPYCYDIV
FLPKEEYTKH ICDCHGIDRN GNPITVPSYM GRYKSHDREH AKLYEERVPC LHCKELIEVN
RLTRLFPLEN YYIHCREKHW K