Gene PICST_33265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33265 
SymbolOCA2 
ID4840747 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp146999 
End bp148945 
Gene Length1947 bp 
Protein Length526 aa 
Translation table12 
GC content47% 
IMG OID640392062 
Productprotein kinase 
Protein accessionXP_001386243 
Protein GI150866593 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCGT CGTCGTCGAC GTCGCTCTCA CGAAAAGACG GCGCTGCCAA TGGCGCTCCT 
TCTGCCTCGG CACCGTCGCA TCGGCTGTTT CTACGCAGCC GCAACTCGTC TGGCTCCATA
TCCAACCGTT CATCCAGAAG TGGACAAAGT GAAAAATTCG ACAATGCTGA AAATCACGGA
AACCACCACC TGGACATTAT CAGCAATACC AGTAACAACC CAAACACGAG CTACCAGTCC
AACGATACAG CTTCAACAGA CACTACAGGC GACCACGAGT TCCACAACGC CAATGCCGAG
TTTGAATTGC ACTCGGCTTC CACGTCCATG GATTTAGCCT CATCGAACCA TTCCCAGCGG
AGCCCGCATT TGAGTTCGCG TGCGTCCACA GCAACACAGC CTACAGTAGT CCGCGACTCG
TCCTCAGACA AGAACAAACC CATAGAGCCA ACAGTGTCTG AACGGTCAAA AAATCTCAGC
TCAAACAATA TCTCTAGTAG TCACTCAAAC AACATTTCCA GTAGCCATAG CCAAAACCAC
CACCAAACCC ATCATGTGAG CGCGCATAGC AGCGTAACTG AAGCCAAAGA CAAAAAACAC
CATCTTTCGC TTAGACGGTT TCTCAAGAAA CTCAAGCATA CAGACTCGCG TGCATCTACA
ACTCTGACCA AAGGAAAGAG CTCAGCAACT TCTAGCCCAA CAGCCAATAC TGTGCCACCA
CCTCTTCCAG ACCTGACTAC TTCAGACTTG TTCAAGAAGT ATGGTCCTAT AGGGAAGCTC
CTCGGCACAG GAGCTAGTGG CTCTGTCAAT TTGGTTACCG CCAAAGATGA CCCTACGCAG
ATCTTTGCAG TGAAGAAATT CCGGTCGAGA ATGCCCCAGG AGCTGGAAAC TGACTACAAA
GTCAAGGTAA AGAACGAATT CAAGATTGGT GACTATCTCA AACACGAAAA TTTGATCTGC
ACCATTGAGC TTATCAAGGA CTACTCACTG AAATCTTCAG CCAATAGCAG CAGCACCAGC
ATCAGTAGTG GTCGTTTCTC CAAAAGAAAG TCACCAAAGT CAACTATAGA ACCAGAATAC
TACATTGTCA TGGAATACTG TCCGTACGAC TTCTTCAACT TGGTGATGAG TGGACTTATG
AGCACAGAGG AAGTGTGTTG CTACTTCAGA CAGATTGTCA GTGGTGTAGC TTTCTTGCAC
GAAAACGGAT TGGCTCATCG TGACTTGAAA CTTGACAACT GCGTAGTCAG CGAGTTTGGT
ATCTTGAAGT TAATCGATTT CGGCTCGGCC GTACAATTTC GTAAGGAAAT CACCGATCCC
AACGCCTCCC ATGATGATCT TGTCGACGAG CAGTACACCT TGGTCAAGGC TAAGGGAATC
GTCGGCTCTG ATCCATATTT GTCTCCTGAG GTGCTTGCTT CTCCTCTGGA AGGGTACGAT
CCTCGTGCTG CAGATGTCTG GTCAGTGGCT GTGATCTTTT GTTGTATGAT CTTGAAAAGA
TTCCCCTGGA AGATCCCAAG GATCTCCGAT CCTTCTTACC GGTCTTTTGT AGGTGCTCCA
AGTAACGCTT CGGAAGATCC AGTAACAGTA ATGCAGAACA GCGTTTCTGA AATGACCGTT
AGCAGCAGTG TCAAGAGTAC AAGAAACGGA CATCACTCCC AGGGTCCAGA ACGTTTGATG
AGATTGTTGC CAGAAGCTTC GCGAGAGTTG GTTCGTAGAA TGTTGATCCT TGATCCTGCC
AATAGAATAT TAATGGCTGA TGTGCTCCAG GATGACTTCA TTAACTCAAT CGAACAATGC
CACATGTTTG TAGACGACGA CAATGGCAAC GAAATCTTTG TGCCAGTCTC AAACCACACC
CATCACTTGG TTACCGAAGA AGACTTGCAG AAGTTGAACC AAGAGAAGGA ACGAGTTAAG
AAGTTGAAGA ACGCCGGAAT GGCATAA
 
Protein sequence
MFSSSSTSLS RKDGAANGAP SASAPSHRSF LRSRNSSGSI SNRSSRSGQS EKFDNAENHG 
NHHSDIISNT SNNPNTSYQS NDTASTDTTG DHEFHNANAE RFLKKLKHTD SRASTTSTKG
KSSATSSPTA NTVPPPLPDS TTSDLFKKYG PIGKLLGTGA SGSVNLVTAK DDPTQIFAVK
KFRSRMPQES ETDYKVKVKN EFKIGDYLKH ENLICTIELI KDYSSKSSAN SSSTSIKYYI
VMEYCPYDFF NLVMSGLMST EEVCCYFRQI VSGVAFLHEN GLAHRDLKLD NCVVSEFGIL
KLIDFGSAVQ FRKEITDPNA SHDDLVDEQY TLVKAKGIVG SDPYLSPEVL ASPSEGYDPR
AADVWSVAVI FCCMILKRFP WKIPRISDPS YRSFVGAPSN ASEDPVTVMQ NSVSEMTVSS
SVKSTRNGHH SQGPERLMRL LPEASRELVR RMLILDPANR ILMADVLQDD FINSIEQCHM
FVDDDNGNEI FVPVSNHTHH LVTEEDLQKL NQEKERVKKL KNAGMA