Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33245 |
Symbol | |
ID | 4840571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 108372 |
End bp | 109337 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640391886 |
Product | predicted protein |
Protein accession | XP_001386235 |
Protein GI | 150866586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATAA TACGAAGTCT GTTCGGAGAG GTTACTTTGA GGAATTTCCC AAAATTACGC CATACGAGAA AATTCGTCAA AATTTCTGGT CCCATAATTG GCCCTCCTAG GAAATCCTAC ATCGCCAATA CGAATGCTCT TCAGTATATC TGGAACCAGA AGATATCGCT AACAACCAAA TATTTCGGGG CAATTGGTAG TTGTGCCTAT ACTTTAGTAC ATGTTCATCA CGACGTGCTA ATTACAGTTT GCCCTCCTCT AGCTATAGGT GGGTACTATT TGTATAAGTT CTTTAGAAAG AAGCAGTACA ATCGAGAAGT TAACAAGATA CTTGGTACAT CGACAGAAAA TGAGAATGGC ATTGTTCGTT TCAAGACATA CGATGAATCG GAACTTGGAA ATGTTCTCAA AGGCATAGAA AATGAGGCGG ACCATTTCAA GAGACAAGTA GTGGATGTGA CTGAACGTAG AATCATAGAC TACATCATAA ACCAAAGAGG CGAACCTAAA GTCAAGAAAT TCTCTGCTTT ATTCATGGAT GAAAATGACC AGTTCTCTGT GAATACCAAT GAAAATGAAG TAGAAAGCTG GATCACGGCC AAGGTAAAAA TTCCCAATGC TGAAGACCAA ACACAATTCA ATGAAGATCT CAACTTCGTT AAGTTATCAT TGCCCTTGTA TTCCAGCAAA GACATCACAT CCAGAAACAG AACTGGAACA ATAGAAGTGA GTTTATTGCA GATATTTCAA GAGGACATAT ATGATGAGAA CGGAAATCTC ATTAAACCCA AGTATATAGA TTATAACATC TCAATCTCTG TCAGCCAGTT CAACTTGCTC AAGCCAGACA GCCTTGTGAT AAGGTACGTC GAAGGTGAAG GTATTTTGAA GAGCAAGTTG ATGCTAGAGG ATAAGGAAGA TGACACAAAA AAGGAAGAGG AAGAGGAAAT TACTGTAAAT ATTTGA
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Protein sequence | MIIIRSSFGE VTLRNFPKLR HTRKFVKISG PIIGPPRKSY IANTNALQYI WNQKISLTTK YFGAIGSCAY TLVHVHHDVL ITVCPPLAIG GYYLYKFFRK KQYNREVNKI LGTSTENENG IVRFKTYDES ELGNVLKGIE NEADHFKRQV VDVTERRIID YIINQRGEPK VKKFSALFMD ENDQFSVNTN ENEVESWITA KVKIPNAEDQ TQFNEDLNFV KLSLPLYSSK DITSRNRTGT IEVSLLQIFQ EDIYDENGNL IKPKYIDYNI SISVSQFNLL KPDSLVIRYV EGEGILKSKL MLEDKEDDTK KEEEEEITVN I
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