Gene PICST_33245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33245 
Symbol 
ID4840571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp108372 
End bp109337 
Gene Length966 bp 
Protein Length321 aa 
Translation table12 
GC content38% 
IMG OID640391886 
Productpredicted protein 
Protein accessionXP_001386235 
Protein GI150866586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAA TACGAAGTCT GTTCGGAGAG GTTACTTTGA GGAATTTCCC AAAATTACGC 
CATACGAGAA AATTCGTCAA AATTTCTGGT CCCATAATTG GCCCTCCTAG GAAATCCTAC
ATCGCCAATA CGAATGCTCT TCAGTATATC TGGAACCAGA AGATATCGCT AACAACCAAA
TATTTCGGGG CAATTGGTAG TTGTGCCTAT ACTTTAGTAC ATGTTCATCA CGACGTGCTA
ATTACAGTTT GCCCTCCTCT AGCTATAGGT GGGTACTATT TGTATAAGTT CTTTAGAAAG
AAGCAGTACA ATCGAGAAGT TAACAAGATA CTTGGTACAT CGACAGAAAA TGAGAATGGC
ATTGTTCGTT TCAAGACATA CGATGAATCG GAACTTGGAA ATGTTCTCAA AGGCATAGAA
AATGAGGCGG ACCATTTCAA GAGACAAGTA GTGGATGTGA CTGAACGTAG AATCATAGAC
TACATCATAA ACCAAAGAGG CGAACCTAAA GTCAAGAAAT TCTCTGCTTT ATTCATGGAT
GAAAATGACC AGTTCTCTGT GAATACCAAT GAAAATGAAG TAGAAAGCTG GATCACGGCC
AAGGTAAAAA TTCCCAATGC TGAAGACCAA ACACAATTCA ATGAAGATCT CAACTTCGTT
AAGTTATCAT TGCCCTTGTA TTCCAGCAAA GACATCACAT CCAGAAACAG AACTGGAACA
ATAGAAGTGA GTTTATTGCA GATATTTCAA GAGGACATAT ATGATGAGAA CGGAAATCTC
ATTAAACCCA AGTATATAGA TTATAACATC TCAATCTCTG TCAGCCAGTT CAACTTGCTC
AAGCCAGACA GCCTTGTGAT AAGGTACGTC GAAGGTGAAG GTATTTTGAA GAGCAAGTTG
ATGCTAGAGG ATAAGGAAGA TGACACAAAA AAGGAAGAGG AAGAGGAAAT TACTGTAAAT
ATTTGA
 
Protein sequence
MIIIRSSFGE VTLRNFPKLR HTRKFVKISG PIIGPPRKSY IANTNALQYI WNQKISLTTK 
YFGAIGSCAY TLVHVHHDVL ITVCPPLAIG GYYLYKFFRK KQYNREVNKI LGTSTENENG
IVRFKTYDES ELGNVLKGIE NEADHFKRQV VDVTERRIID YIINQRGEPK VKKFSALFMD
ENDQFSVNTN ENEVESWITA KVKIPNAEDQ TQFNEDLNFV KLSLPLYSSK DITSRNRTGT
IEVSLLQIFQ EDIYDENGNL IKPKYIDYNI SISVSQFNLL KPDSLVIRYV EGEGILKSKL
MLEDKEDDTK KEEEEEITVN I