Gene PICST_33231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33231 
Symbol 
ID4840591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp73045 
End bp73536 
Gene Length492 bp 
Protein Length163 aa 
Translation table12 
GC content41% 
IMG OID640391906 
Productpredicted protein 
Protein accessionXP_001386029 
Protein GI126139013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.281696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGG GCACAACTCC GACAGGATCA ACGCGTCAGG TCGCGCTAGA AAGAGAACTA 
GCACAACTAA TAAGGATAAA TTCTACTGTA GCTAATCTCA TTGAAACCAT CAAATATACT
CATTCCAATA TAGCGAAGAT CAACGAATCT GGAAATAGCA CACATACATT GCTTGACCAA
TGGGTGCGGA TACTTTCACA GACAAATTTC ACTCATGATA TCATCAACGA CCGTACTTGG
AACGGAAAAG AAGATCAGGA ATTGGAAGAA GAGGATGACG ATTTGGCACA GAAAGAAATC
TTGGAGCAAC AACTTTTGAA CCAATTGTCC AAACTTGAAG CTGAAAACTC TGAATTAAGC
ACAAAGATAG AAACGAAGGA ACAAGAACAC GAACAAGCAC GTCAGAGACG TAATGACATT
CTAGTACAGA GGAAGAGAGA GTTGGGGTTG TATACTGTAT CTGGCAGAGA TGCTACCAAA
AGAAGAAGAT AG
 
Protein sequence
MESGTTPTGS TRQVALEREL AQLIRINSTV ANLIETIKYT HSNIAKINES GNSTHTLLDQ 
WVRILSQTNF THDIINDRTW NGKEDQELEE EDDDLAQKEI LEQQLLNQLS KLEAENSELS
TKIETKEQEH EQARQRRNDI LVQRKRELGL YTVSGRDATK RRR