Gene PICST_33229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33229 
Symbol 
ID4840589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp70597 
End bp71532 
Gene Length936 bp 
Protein Length311 aa 
Translation table12 
GC content43% 
IMG OID640391904 
Productpredicted protein 
Protein accessionXP_001386227 
Protein GI150866580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.841869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGG AGGTGTCTTC CGTATACGAC CGTCATTTCC GATTCATCGA GATGTTTTTC 
CGCCAGATCC AGCAGCGTTT CAAAATGAGT CCATCTGAGT TTTTGTTCGT GATCTCATTT
TTAGTGAACT TTGTAATAGG AAAAATAGTA CATTCGTTGT CACCAGATGA AGAAGTGTAC
AACTACTACA CGAATAAGAA GAACGTGCTC AACCAGGTGT TTGTGAAAAA CGGCTGGTTC
TGGACCACAG CCAACATTGT CCTATTCTAC GGGATAGTGT TGTATAAAGA AAAGAGCAGT
GCCATTAGAA TTAATATAGC CAAGGGTGCA GTAATCAGAT ACGTGTTGGC CACAGTGTGG
TGGATCTTTT TTACCCAGTG GTTTTTTGGC TTGCCCATCA TGGATAAGGT ATTTGTATAT
ACAGGCGGTA GTTGTGTGAT AGAGAAAGAG ACTCATCCTG GTCAGAGCCG TTTTCTCCAT
CTTTTCGAAG CAGCAGGCGA AGAGGTTGGC AACAAGTTGA GTTCAACTTC TATTACTTCC
TATCATTGCC GAAGGATCAA GGGATCCTGG GAAGGAGGAC ACGATCCCTC GGGACATGTA
TTCCTTTTGA TTCATTCTTC GCTCTATTTG TTTTTGGAGG TGTCTCCATA TTGGGTGTCT
TATTCTCATT TCAAGGCTTC GTTGTCTAAG CTTCGTAAAG AGGTTGTTAA GCCTGTGAGT
TTAGGTGAAA AATTCAGTAG CTTTATAAAA TATCTGGTTG CAAATCCACC GATTGTTGTC
GCTAAGTTGA TCACATTATG GTGGTTCATG TTGCTCATGA CCAACATCTA CTTCCATTCG
CTTGGTGAGA AGTTGGTAGG GTTGGTGTTT GGGTACATTG GCGTAGTGGG AATTTACTAT
GTGCCACGGA TTGTAGAGAA GCAGAAGCAG CAGTGA
 
Protein sequence
MPSEVSSVYD RHFRFIEMFF RQIQQRFKMS PSEFLFVISF LVNFVIGKIV HSLSPDEEVY 
NYYTNKKNVL NQVFVKNGWF WTTANIVLFY GIVLYKEKSS AIRINIAKGA VIRYVLATVW
WIFFTQWFFG LPIMDKVFVY TGGSCVIEKE THPGQSRFLH LFEAAGEEVG NKLSSTSITS
YHCRRIKGSW EGGHDPSGHV FLLIHSSLYL FLEVSPYWVS YSHFKASLSK LRKEVVKPVS
LGEKFSSFIK YSVANPPIVV AKLITLWWFM LLMTNIYFHS LGEKLVGLVF GYIGVVGIYY
VPRIVEKQKQ Q