| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90702 |
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| Symbol | NOP4 |
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| ID | 4840195 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 601914 |
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| End bp | 604119 |
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| Gene Length | 2206 bp |
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| Protein Length | 694 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391510 |
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| Product | RNA recognition motif-containing protein |
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| Protein accession | XP_001385462 |
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| Protein GI | 126137878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACGTTCTGCG ATGTCTGAAG ATCAAACAGA GCATGTGGCC GAGGTGTCCA TTAAGCAATC
AAGTTCTGTA GACGAAGACG GACTTGACAG AAAAACGTTG TTTGTGCGTT CCATACCCTT
TGAGGCTACA TCTGAAGAGT TGTCAGAGTT CTTTTCACAG TTTGTGCCAG TCAAGCACGC
AGTCATAGTC AATGATGAAA ACCAGAAGTC CCGAGGTTTC GGTTTCGTCT CCTTCACACT
TGACGACGAC ACTTTGACTG CTTTGGTGGA AGCCAGAAAA TCCAAGTTCA AGGGCCGTCT
TCTCAGAGTT GATATTGCCA AAAGAAGAGA AAGAAAGGAT AGAAACGAGT TACCCTCTTC
TTCACCAAGA AGTTCGGCAG CTCCAGTAGA AAAGAGAAGA GCCAGACTTA TCATTCGTAA
CCTTCCATGG TCTTGTAAGA AACCAGATGT GTTGAAGAAG ATCTTCTCTA ATTTTGGAGC
TGTTTTTGAT GCATACATTC CCAAGAAGAA GGGCGGGCAA ATGTGTGGGT TTGCATTTGT
TACCATGAAA AAACAGGCTG CTGCTGAAAG AGCAGTGAAG GAGTCTGTAG GATTGAAGAT
AGACGGCAGA GAAGTTGCAG TAGATTTGGC CGTGGAGAAA TCCAAGTGGG AAGAAATAAA
GGAGGATGAA GAAGATCAAG AAGATCAAGA TGAAGATGAA GATGAAGATG TGGAAGAAGA
AGAAGATGAC GATGAAGAAA ACGGCGAAGA TGAAGATAAT AAGAACGAAG ATAATGATGA
CGAAGAAGAA AATGCGGAAG AAGAAGAAGA AGATTTCAAC AACTTGAACG AAATCAACTC
TGATGCTGAA GTTGAAGAAG ATCAAGAGGA GGAAGAAGAA GAAGAAGCTC CAAGAAAAAA
AAATAATAGA CAAGAACCAT ATGCCATTTT CGTGCGTAAC ATTCCATACG ATGCTGACGA
AGATTCTCTT GAAGAACACT TCTCTAAGTT CGGACCTGTG AAGTATGCTT TGCCTGTTAT
CGATAAAGAA ACTGGTTTGG CCAGAGGTTC TGCATTTGTT GCATTCGTCA ACGAAGATGC
ATACACAGAC TGTTTGTCAA ATGCTCCATC TTCAGCTTCT ACTTCAATGT TGATCGCTGA
TGATGTTTCT CCAGCATATG TTTACCAAGG TCGTATCTTG TCGATTACCT CGGCAGTGGA
CAGACAGTCG GCATCCAAAT TGGCAGAGAG GAACTCGGAA AAGAGAAAGG AGGTACTCGG
TAAAGCTCCA GGTGAAAAGG ACAAACGTAA TTTGTACTTG TTGAACGAAG GTAGAATCAC
GTCGAACTCC AAGTTGGCTC AGTTTATTTC CAAGACTGAC ATGGAAATGA GAGAAAAGTC
ATACAAATTG AGAGTTCAAC AGTTGAACAA GAACCCTACA TTGCATTTAT CATTAACCAG
ATTGGCTATT AGAAATCTTC CTAGAGCCAT GAACTCGAAA GCCTTGAAGG CTTTGGGTCG
TAAAGCCGTT GTTCAATTTG CTACTGAAGT CAAGGAAGAA AAGAGACAGC CTCTTTCTAA
AGAAGAAGTC AACCGTTCGA TCAAACATAA GCAAGAGCTT GGAGAATTGG AACCAAAGGG
AGCCACAGAA GAAGATAAGA AAAAGTCATC CAAACATAAG GGTGTTGTAA AGCAAGCCAA
GGTGATCATG GAAGTGAAAG GCTCCGGAGA TACAGGGAGA AGTAGAGGAT ATGGTTTCAT
TGAATTCAGA GACCACAAGG TTGCCTTGAT GGGTTTGAGA TGGTTGAATG CTCATGAAGT
GACAGTTCCC GAGATCTTGG AGGGTCTTGA CGAGGACGAG AAGAAGTTGG CTCAACTCGA
TGGATTGAGC AAAAGAAACT TGATTGTCGA ATTTGCTGTG GAAAATGCCC AAGTTGTCAA
GAGAAGAAGA GATAAGGTAT TTCATTCTCG TCAACACGAC AAGAACGATG AAGAGGGTCC
CAGAAAGAGA AAGAGAGATA ACAGGGGTGA CGAAGAAAAG GGTTCCACTT ATAAGGAAAG
AAAGAAGGCA AGAAAGGGCT CTGCCAAGAA GGGTAACATG AACAAAGGTA ACATGAACAA
GGGACCAACG ACTGATGGTG AAAAGAAGGA GCACAAGTCG GGACTCTCTG ACGATATCAA
GAAGATTATT GGTCAAAAAC GTAAGAGAAG AAAGGGAAAG AATTGA
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| Protein sequence | MSEDQTEHVA EVSIKQSSSV DEDGLDRKTL FVRSIPFEAT SEELSEFFSQ FVPVKHAVIV
NDENQKSRGF GFVSFTLDDD TLTALVEARK SKFKGRLLRV DIAKRRERKD RNELPSSSPR
SSAAPVEKRR ARLIIRNLPW SCKKPDVLKK IFSNFGAVFD AYIPKKKGGQ MCGFAFVTMK
KQAAAERAVK ESVGLKIDGR EVAVDLAVEK SKWEEIKEDE EDQEDQDEDE DEDVEEEEDD
DEENGEDEDN KNEDNDDEEE NAEEEEEDFN NLNEINSDAE VEEDQEEEEE EEAPRKKNNR
QEPYAIFVRN IPYDADEDSL EEHFSKFGPV KYALPVIDKE TGLARGSAFV AFVNEDAYTD
CLSNAPSSAS TSMLIADDVS PAYVYQGRIL SITSAVDRQS ASKLAERNSE KRKEVLGKAP
GEKDKRNLYL LNEGRITSNS KLAQFISKTD MEMREKSYKL RVQQLNKNPT LHLSLTRLAI
RNLPRAMNSK ALKALGRKAV VQFATEVKEE KRQPLSKEEV NRSIKHKQEL GELEPKGATE
EDKKKSSKHK GVVKQAKVIM EVKGSGDTGR SRGYGFIEFR DHKVALMGLR WLNAHEVTVP
EILEGLDEDE KKLAQLDGLS KRNLIVEFAV ENAQVVKRRR DKVFHSRQHD KNDEEGNMNK
GPTTDGEKKE HKSGLSDDIK KIIGQKRKRR KGKN
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