| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90675 |
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| Symbol | |
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| ID | 4840120 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 258163 |
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| End bp | 262014 |
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| Gene Length | 3852 bp |
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| Protein Length | 1114 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391435 |
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| Product | predicted protein |
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| Protein accession | XP_001385388 |
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| Protein GI | 150865960 |
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| COG category | [K] Transcription |
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| COG ID | [COG5179] Transcription initiation factor TFIID, subunit TAF1 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.621061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00727478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | CCCAAACTCT AAGCTTCAGC ATCAAACTAG TTCAGTACCA ATTGCATCTC TTTCTTCTCT
CATTTGCATC CTCGATCTCC CTTATCTTAA TCTCACAGGC TGCATTTTGT CGTTCATAAA
CCATTTTATT AAATCGAAAT TTATAAATAC AGCTCAAAAA CCGCGGAACT CGTATGAAGA
TTCCCTACAT ATTGCCTCGT TTGCTGCAAC TTACCAACAA GGAGACGATG GTAGAGAGAA
GCCGCAAAGG CAACTCGAAA GTCGAGGATG AGACCGCCTT CAACCAATTT GTAGAATCAG
CTGAAGTTCC TGACGATACC GTGATAGAAG CTATTTTTCT GGAAAGGAAA ACGGAACATG
CTGTAGACGC TGTAGACTAC GAAGATATCG ATGAGTTGGC AGATGAAGAA GACCTTCCCG
AGGAAGAAGT TAGCACCAAC AATTTGGACG ATGTAGACGA AAACGACAAC TTCGAAGCGT
TTCTAGATGA ACCTCAGAAA GAAGAAGAGC TCCAAAACAG AGCCAATGAA GAGTTTGATG
ACATGTTTGG CGACGGAGGG TTTGAGGATG CTGGTGGAAA CAACAACTTG TTCACTGATT
TGGATCACAA TAACCATCTC ATAGATGATG ACGGCTTGAC GGACTTGAAC ATGGGTGGAA
TATTTGATGA AGAAACTACT CAAAGTCAGA CAAGCATTCC TTCTATCAAG AAAAGAGTTC
TTCTGGAAGA ACAGAGAAAG ATAAAAAGAC AAAGACTAGA GAATATCGTA AAACGACTTG
AAAATCAGAG AGTTAGACGT AATATAGCAT ACCACTTCCC ATCCTATTCC AGAAACAAGC
CATTTAACTT TCATAACTTT TTTCTTCCTG AGCCCAAATA CTATCGGTAT CAGAAGCCAT
ACATCGCGTA CAAGGAGAAT ATCAAGCCTC TTGTGCCTAC AAAGTTAAGT CTTGAGTTGG
AAGTTGATGA GAGAAAACTA TTCAAATCTA GAAAGCCTTT ATCAAATTCC AAATCTACTA
AAGGTATAGT AAGTGTAACC CAGCAAGATA TTGAATTCAT CAGAGACTTG AACAGTAAGA
GCTCCCTGAC AGAGACATTA TTGAAACAGA TCTCGTTCTT GAAGAATGAC TGGACCAATA
ACGACAAATT CACAAACTAT TCCAAAGACT TGATTCTTTC TACTACAGAT TGGAACGACG
ATGCCATTAT CAATGCTGGC GATACCAAGT TCGCAGTCAA GAAAGTCAAC TTTGAATCGA
ACACTGTTGA TACGCTGACA TTTGACGAAG AAGATGAAAA CATATTCAAT GGCCAGTTGA
ACACAGATCT ATTGAAGTTG GACATGAATG ATCCTAACTT GTTGTTTGTT CCGGAAAAGA
AGTCAAATAA ATCGAAATCG TTGATTCCAA CTAACGAAAA GTTGTTGCTG TTGAAATTCA
ACATTTCAAA TGATAAACAG TACGAAATCT TGAAGTCTAA CTACAATACT AAGGTTAGAA
GTCAGTTGAG TAACTTAAAT ATCGAACATT CCATCCCTGC ATTAAGACTT CAATCTCCAT
ACTACAAGGT CAAGTTGACT AAGGAAGAAT CTCGTTCCTT CCACAGACCC AAGTTTGTTA
TCAGACCAGG TTCTTTGATA AGTTTCTCCA AACTTAAATT GCGTAAGAAG AAGAAAGATC
GTGGTAAATC ACTACAAGAA GTATTTTCTA AAACTTCAGA TTTGTCTACT ACTGACACTG
CTCCCTTGGT TGCAATGGAA TACTCAGAAG AATATCCGCT CATACTTTCA AACTTTGGTA
TGGGCTCCAA GATGATCAAC TATTATAGAA AAGAAAGGGA AGACGATTCA TCAAGACCAA
AGGCTCAAAT TGGCGAGACA CATGTCCTTG GTGTTGAGGA CAGATCTCCC TTCTGGAATT
TTGGAGAGGT AGCCCCGGGA GATTTTGTTC CAACTTTGTA TAACAATATG GTAAGAGCTC
CTATATTCAA GCATGAAGTT AAGAATACTG ATTTCCTCTT CATCAAATCC CAAGGTGCCG
GTTCGCATCA AAGGTACTTC TTGAGGGCTA TTAACTTCAT GTTCTCTGTG GGTAATGTCT
TTCCTGCTGT AGAAATCCCA GCACCACATT CCAGAAAGGT TACCAATACG TCGAAGAATA
GATTAAAGAT GGTTGTTTTC AGAGTAATGA ATAGCATGGG TGTCGCTCGT GTGTCGGTTA
AAGACGTTTC TAGACACTTT CCTGACCAGA ATGATATGCA AAATAGACAG AGATTGAAGG
AGTTCATGGA ATATCAGAGA CAGGGTGATG ACCAAGGTTT CTGGAAAATC AGAAATAGCG
ACAGTGTTCC AAATGAGAAC GAAATAAGAT CCATGATTAC TCCCGAAGAC ATTTCTTTAT
TGGATAGTAT GCAATACGGT CAACAGACAC TAGACGATAC CTACATGTTG TTTAACAATG
ATAAAAAGGA CGAAGCCAAA AAGGAAGAAA AGAAGGAGAA AAAAGAAATC GAATCTAATG
AAAAAGATAA AGAAAAAGAA AAGGAAAAAG ATAAAGATAA AGAGGACAAT GAAAACGAAG
CCCAAGAGAA TGGCTCGAAG AAAGAAAAGG ATAAAGAAAA AGAACGAACA AGAAGACCCA
GAGATCCAGA TGCCGAAGTT GATATGGACG AGGAATTGGC TCCTTGGAAC TTGTCTCGTA
ACTTTGTCAA CGCAAACCAG ACTAAGTCGA TGTTGCAGCT TAACGGTGAA GGAGATCCTA
CAGGTATTGG GTTGGGCTAT TCTCTTTTGA GATCTACACA GAAAAATGGT TTCAAGCCGC
TATTTGCACC TGTCAGAGAG AATGTTCCTA AAAATAATAC TGCTGCCTAT CAGCAGAAAT
TATATGAGGC TGAGGTCAAG AGAATTTGGT ACTCTCAGAG GAGTTCGTTG GTCGATCACG
GACCTGACTT CAATCTTCAA GCCATCTATG ATGAATACAA ACCAGTCAAT CAAATGAAAA
CGATAAAAAA CATGGTCAAA CAGGAAGACA AGAATGACTT CGAAAACAAG GTGTTGAGAA
TTACTAGAAG AGTCAGAGAC GAGAATGGCA TTCTCCAGAG AAAAGTTGAA ACAATCACCG
ATCCGAGGTT GATCACAGCA TACATCAGAC GCAAGAAGCA GATTGAAGAT GAAATGATGA
AGAATGCTGA AGTGGGTGAC ATTTTGCCTA CAAATGACAA GGAATTGAAC AAGATTCGTC
GTAAGATTTT GGAAGAGAAA TTGGCTTCAG CAGAAAAAAG AGCCAAACAG AACAAATCTA
AGAAGCCTCC CAAAGATTCT ATCCATGCTG CTGCCGCTGC TGGTGGTACG ATTATCGATG
CCAACACTGT CATGTTGCCG GATGGTTCAT ATGCCATCGG TGGTAAAGGT ATTGGAAAGG
GTAAGTCTAA AACACGAAGG TGTGCTTCTT GTGGAGCATT TGGACACATT AGAACTAACA
AGACATGTCC ACTTTATGCA ATCACAAGAG GTGGTACTGT TCCTCTCCAG AAAGACGAAC
AAGGTAATCC TATAATCCCA GCATCAGTGA TTATTCCACC AGGTATGATT GGTATTACTG
CAAGACATGC ACCACCAGTA CCTGAACAAG CTCCAGCTTC TGACGTGGCA CAAGCGACTT
CTGCGTCCCC ACCAGCTCCA GCTACAGCTG CACCTACGGA TCAATAATAA ATTTTACGCA
TAAGTCTATA AGCAACCATG AAACGAAACA AACTATAGTT GTAGTATAAT CTATTCATTG
TAAAGTGAAT CTATATAATG TGAGTTGTTA CGGGCGGGCC GTCCACGCAT TTAGAATGTA
ATTTGCTTGA TG
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| Protein sequence | MKIPYILPRL SQLTNKETMV ERSRKGNSKV EDETAFNQFV ESAEVPDDTV IEAIFSERKT
EHAVDAVDYE DIDELADEED LPEEEVSTNN LDDVDENDNF EAFLDEPQKE EELQNRANEE
FDDMFGDGGF EDAGGNNNLF TDLDHNNHLI DDDGLTDLNM GGIFDEETTQ SQTSIPSIKK
RVLSEEQRKI KRQRLENIVK RLENQRVRRN IAYHFPSYSR NKPFNFHNFF LPEPKYYRYQ
KPYIAYKENI KPLVPTKLSL ELEVDERKLF KSRKPLSNSK STKGIVSVTQ QDIEFIRDLN
SKSSSTETLL KQISFLKNDW TNNDKFTNYS KDLILSTTDW NDDAIINAGD TKFAVKKVNF
ESNTVDTSTF DEEDENIFNG QLNTDLLKLD MNDPNLLFVP EKKSNKSKSL IPTNEKLLSL
KFNISNDKQY EILKSNYNTK VRSQLSNLNI EHSIPALRLQ SPYYKVKLTK EESRSFHRPK
FVIRPGSLIS FSKLKLRKKK KDRGKSLQEV FSKTSDLSTT DTAPLVAMEY SEEYPLILSN
FGMGSKMINY YRKEREDDSS RPKAQIGETH VLGVEDRSPF WNFGEVAPGD FVPTLYNNMV
RAPIFKHEVK NTDFLFIKSQ GAGSHQRYFL RAINFMFSVG NVFPAVEIPA PHSRKVTNTS
KNRLKMVVFR VMNSMGVARV SVKDVSRHFP DQNDMQNRQR LKEFMEYQRQ GDDQGFWKIR
NSDSVPNENE IRSMITPEDI SLLDSMQYGQ QTLDDTYIPR DPDAEVDMDE ELAPWNLSRN
FVNANQTKSM LQLNGEGDPT GIGLGYSLLR STQKNGFKPL FAPVRENVPK NNTAAYQQKL
YEAEVKRIWY SQRSSLVDHG PDFNLQAIYD EYKPVNQMKT IKNMVKQEDK NDFENKVLRI
TRRVRDENGI LQRKVETITD PRLITAYIRR KKQIEDEMMK NAEVGDILPT NDKELNKIRR
KILEEKLASA EKRAKQNKSK KPPKDSIHAA AAAGGTIIDA NTVMLPDGSY AIGGKGIGKG
KSKTRRCASC GAFGHIRTNK TCPLYAITRG GTVPLQKDEQ GNPIIPASVI IPPGMIGITA
RHAPPVPEQA PASDVAQATS ASPPAPATAA PTDQ
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