| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90608 |
|---|
| Symbol | CTK2 |
|---|
| ID | 4839788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 658759 |
|---|
| End bp | 660120 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640391103 |
|---|
| Product | RNA polymerase II C-terminal domain kinase beta subunit |
|---|
| Protein accession | XP_001385476 |
|---|
| Protein GI | 150866016 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG5333] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.63293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.603982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCCTTTCCCA GCATCACCCA GATTTCTAGA CCATACTTCA CCCATTCAGA GATCTCACAT
TTACTCCGTC AAACTGTTGA TGATGCCCAT TCTGCTCTGT ATGGTTCGAC AAAGATGAGG
GTATTCCAAT TTTCGTTTCA TATTATCAAA CAGTTGAAAT TTCCCTTGCG AGTGTTATCT
ACCACGATGA ACTACTATCA ACGATTCTAT CTTTTCAACA GGTTCCAAGC TTCAGAAGAG
GCTCAGGATA TCGGCGACTT GGAACGTGAT CCGTTCATGG TCGCTGTGGC GTGCCTCTTT
TTGGCTGCCA AAAACGAAGA CTGTATCAAG AAACTCAAAG AGATCCAGTC TGTAGCAAAT
AAGTTGAGAG ATATCGATGA CACCCAGAGG ATCTCGTCTA TTTCCGCCTT GGGTTTTGGT
GCTGGCTCAT TTTCTAATAA TGGACTGACT GGCAGCACCA GTATCAACAG CTCAAGTATC
TCAAGCTCTT CCACCGTAGC TGACCTTCAA CGGCGTGCTG TGATGTCGCT TGAGTTCAAG
TTGCTTCAAA TCATCAAGTT CGACTTCAAC AACGGCGCTA CCGTATCGAT CAAGTCCCTG
GACCAATTAG TGACTCAGTT CTGTAAGAAG TTGAATATCA ACTACCGACT TTCTCTCTTC
AGCTGGCTTA TCAACTTCGA CCTCATGTCG CTGCCGTTGT GCCTTGTGAT TCCGCCTCAT
TGTATCGCAC TAGCAATTAT CATCATCAGT TTGAATTTGA AGCCTAAGGA GCTCAATATT
ACACATGAAA TGGTAGATGA GGAAAGCGAC GAGGAGCTTA ATGCAAAATT GGACTCATTT
GATTGCTATG TTGACTTTAG GTGTCCCGAG CTGTTGGTCA ATGAAGGTAT TCTCTATGTC
TTGGACTACT ATATCCACCT GTACCAGCAT TCTATCCTCA ACCAATATTT GCCGGCAATA
GATCGTGAAA CAGGAAAGGA GCAGATATTC AAGTTCATGG AGTTCAAGTC CCGTTTCAAT
GATCTAAAAA CCTTGAACGA ACACAGCACA GCAACAAGAC CACTTCTCCA GCAAGATAAG
TACCTTCAGC CTTGGGACTA CTCTATAGCA ACCAAGGGAA CAGCCAGATT TATGCCTGGA
AACAAACGTA GAAGATTCTC GAGAGAGTCA GGAAAACCCC GTCAGATGTC TAACTCATAA
ATGTAATTAC AAACATATTA AGTTGTATAT AAATGTTAGT TGTATTCTAT ATGGATGAGT
ATCACGTACT CGGTATGGTA GATTTTGTAT AGTACAAGAT ATATTGAGTA CGTATGTTAT
AGACTATGAA GAGTTCTGTA TACTTTAAGC AATCACCTCT TA
|
|---|
| Protein sequence | MRVFQFSFHI IKQLKFPLRV LSTTMNYYQR FYLFNRFQAS EEAQDIGDLE RDPFMVAVAC
LFLAAKNEDC IKKLKEIQSV ANKLRDIDDT QRISSSTVAD LQRRAVMSLE FKLLQIIKFD
FNNGATVSIK SSDQLVTQFC KKLNINYRLS LFSWLINFDL MSSPLCLVIP PHCIALAIII
INEESDEELN AKLDSFDCYV DFRCPESLVN EGILYVLDYY IHSYQHSILN QYLPAIDRET
GKEQIFKFME FKSRFNDLKT LNEHSTATRP LLQQDKYLQP WDYSIATKGT ARFMPGNKRR
RFSRESGKPR QMSNS
|
|---|
| |