Gene PICST_90569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90569 
Symbol 
ID4840366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp705906 
End bp706974 
Gene Length1069 bp 
Protein Length320 aa 
Translation table12 
GC content43% 
IMG OID640391681 
Productpredicted protein 
Protein accessionXP_001385488 
Protein GI150866023 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5031] Uncharacterized protein involved in ubiquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.452398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCGACTATC ATGTTTGCGA GGTCTGCATT GGGCAGGTCC GATCAGTTGG TGACAGCTTT 
GAACTCGCAG AAAAGGCAAT TTGTCCTCAC AGCAGCCACA ACAGCCTTAG GTTCATTACT
TTTCAGCGAG GACAACCGGT TGGCTTCACA GATGGAGAAG GGTCTATTGC ACAACAAAAA
TGCTGAAAAT TCCGCTTCAA TACCAAATAC AGCGAATAAA TTCTTCCTGA GACCAGAGGC
CGAGTATCCT GGTCATGTAC CTCTCTACAC CTTTGAGAAA ATGTTGATGT TCTTGGGTTC
CTCAGTAGGT GCCTACACAC ATCCCGAGCG AAACGAGTTC ATTGTAGCTT TGGGAGAGTC
TACTGCCATC ACTCCAGTTT TGAGACGGTT ACAACATCAA ATGTTGAGCG ACCCTGTGGG
AAGACAGATT TTGCGCGAAA GACCTAGAAT GACGTCGACG TCGTTGGACT TAGAGCATCT
TAGGGAATTG CCCGATAACA CTATTGGTAA GACTTATGTC AAATGGTTGG ACAAGGAAGG
AGTCAGTCCG GACACGAGAG TTGAAGTCAA ATATATTGAC AATGAAGAAT TAGCCTACAT
TTACCAACGT TACCGTGAAT GCCATGACTT CTACCATGCC ATCACGGGGT TGCCTATTAT
TATCGAAGGA GAAATCTCAG TGAAGGTATT TGAGTATATG AACATCGGCA TTCCCATGAG
TGGTTTAGGG GCCCTCTTTG CCCCCTTAAG GTTGAAAAAG AGCCAGAAAG AAAGACTCTA
CAACATCTAC TACCCATGGG CATTCAAAAG TGGCTTGAAC TCCAAACCAT TGATTAACGT
CTACTGGGAG AATATTCTCG AAGAGGATAT CGATGAGTTC AGAAAAACAA TGGGAATCGA
ACAACCACCA GATTTGCGTA ATTTGCGTAA GGAATACTTC AAAAAGTTGA AGGAGGCAAA
AAAGATCGTC TAGTTCCATC AGAGGGGAAA CAAATCGACA ATAAATTCAC TAAAACCAGC
AGCTAATTGT ACATAGAGAA CATAATGATA ATTTTACGAA AAGTTTACG
 
Protein sequence
MFARSALGRS DQLVTALNSQ KRQFVLTAAT TALGSLLFSE DNRLASQMEK GLLHNKNAEN 
SASIPNTANK FFSRPEAEYP GHVPLYTFEK MLMFLGSSVG AYTHPERNEF IVALGESTAI
TPVLRRLQHQ MLSDPVGRQI LRERPRMTST SLDLEHLREL PDNTIGKTYV KWLDKEGVSP
DTRVEVKYID NEELAYIYQR YRECHDFYHA ITGLPIIIEG EISVKVFEYM NIGIPMSGLG
ALFAPLRLKK SQKERLYNIY YPWAFKSGLN SKPLINVYWE NILEEDIDEF RKTMGIEQPP
DLRNLRKEYF KKLKEAKKIV