Gene PICST_90470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90470 
Symbol 
ID4839841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1060449 
End bp1060889 
Gene Length441 bp 
Protein Length103 aa 
Translation table12 
GC content41% 
IMG OID640391156 
Productpredicted protein 
Protein accessionXP_001385558 
Protein GI126138070 
COG category[B] Chromatin structure and dynamics 
COG ID[COG2036] Histones H3 and H4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000995977 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.361708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTTCAGTTA ACAACACAAT CAATTAATCA GTAACAATGT CCGGTAGAGG AAAAGGTGGA 
AAAGGTTTAG GAAAGGGTGG TGCCAAGAGA CACAGAAAGA TCTTGAGAGA CAACATCCAA
GGTATCACCA AGCCAGCTAT CAGAAGATTG GCCAGAAGAG GTGGTGTCAA GCGTATCTCT
GCTTTGATCT ACGAAGAAGT CAGAGTCGTC TTGAAGTCGT TCTTGGAAAA CGTCATCAGA
GATGCTGTCA CTTACACTGA ACACGCCAAG AGAAAGACCG TCACCTCTTT GGATGTCGTC
TATGCCTTGA AGAGACAAGG TAGAACCTTG TATGGTTTCG GTGGTTAAAC ATGCTTTTGT
TGAACATTGC AGTTTTTCTT CCTTTGTGTA TTCTAGCTAT TCCAAGACTA TTACAGTGTA
TATTAGTAAA CATCATGAGT T
 
Protein sequence
MSGRGKGGKG LGKGGAKRHR KILRDNIQGI TKPAIRRLAR RGGVKRISAL IYEEVRVVLK 
SFLENVIRDA VTYTEHAKRK TVTSLDVVYA LKRQGRTLYG FGG