| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90444 |
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| Symbol | GDI1 |
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| ID | 4839773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 54680 |
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| End bp | 56361 |
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| Gene Length | 1682 bp |
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| Protein Length | 454 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391088 |
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| Product | Secretory pathway GDP dissociation inhibitor |
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| Protein accession | XP_001385697 |
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| Protein GI | 150866189 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5044] RAB proteins geranylgeranyltransferase component A (RAB escort protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.120093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACAAGCAGCA ATTGACGTGG ACACGCAATT CAGAGAATTA CTATACGGTA GTACTATCGA
TACGTGATCT GGCTTTGAAT CCAATTGAGC CGCTATACCA TTACTGTCTT CTCAATTTTG
AATCATAATT TTGACTCCTC AATTCCAATT CCACAATTAC AATCTTGTTT GTACTCTACA
ATATTCAATT GTACAATTAG ATTGATTTTG AGACTGACTT TAATTTTATC TTAATTATAT
TAATTTGATA GTTATTCTCG CTATGGACGA AAACTACGAC GTCATCGTGT TGGGCACAGG
TTTGACCGAA TGTATTCTCT CCGGGATCTT GTCGGTAGAA GGCAAGAAGG TGTTACACAT
CGACCGCCAG GACTTCTACG GTGGAGAATC GGCATCGTTG AACTTGTCCC AGTTGTATAC
CAAGTTTAGA CCTTCGGCTC AGAGACCGGA ATTGAAGGGC AGAGACCGGG ACTGGTGTGT
AGACTTGATT CCTAAGTTCT TGATGGCCAA CGGCGAGTTG ACTAACATCT TGGTTCACAC
GGATGTGACT CGTTATATCG ACTTCAAGCA GATTGCTGGC TCGTATGTGT ACCGGAATGG
CCGGATTGCC AAAGTTCCTG CCAATGAGGT CGAGGCTCTT AGATCTAACT TGATGGGCCT
CTTTGAAAAG AGAAGAATGA AGCGTTTCTT GGAATTCATT CAGAATTATG ACGAAGACAC
GCCATCGACC CACCAGGGTT TCAACTTAGA TACCAACACC ATGAACGAGA TTTATACCCA
TTTCGGACTC GAGAATGGAA CCAAGGACTT CATTGGTCAT GCCATGGCCC TCTGGCACAC
GGACGACTAC TTGAACGATG TGGCACGTCC AACTTACGAA CGTATCATCT TGTACGTTCA
ATCAGTAGCC AAACACGGTA AGTCCCCTTA TCTCTATCCA TTGTACGGTT TGGGTGAGTT
GCCTCAAGGA TTTGCCAGAT TATCTGCTAT CTATGGAGGA ACCTTTATGT TGGATACTCC
AATTGACGAA GTGTTGTACG ACGAGACTGA CGGAGTCAAA AAGTTTGCTG GTGTTGTCAC
TAAAGAAGGC ACAGCAAAGG CTCCTATCGT TATTGCTGAT CCTACGTACT TTCCTGAAAA
GGTGAAAAAG ACTGGTGCCA GAGTCATCAG AGCTATGTGT ATTTTGGAGC ATCCAGTTCC
TAACACAGGT GACACTGACT CAGTCCAGAT CATCATTCCA CAGAACCAAG TTGGTCGCAA
ACATGATATC TACATTGCTG TTGTCTCCGA TGTCCACTGT GTTGTACCAA AGGGCTATTA
CTTGGCTATT GTTTCGACTA TTATCGAGAC AGACGCTCCT CACATTGAGT TGGAACCAGC
TTTCAAATTA TTGGGTCCTA GAATCGATAC CTTGATGGGC ATCACCGAGA TCTACGAGCC
CATCAACGAC GGCACCGCTG ACGGAATCTA CATCTCCAAA AGCTACGACT CATCCTCACA
CTTTGAGTCA ACCACGGACG ACGTCAAGGA CTTGTACTTC CGTATCACTG GCAAGCCCTT
GGTGTTGAAG AAGAGATCGA CTACTGAAGA AGAACTGCAG GACGAGGCTA CCATCGGAGG
TCTTTAGGTA CATTGATATA TACGACTTGA TTAGTATACA ATATTACGAT TTATTAAGAC
AT
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| Protein sequence | MDENYDVIVL GTGLTECILS GILSVEGKKV LHIDRQDFYG GESASLNLSQ LYTKFRPSAQ
RPELKGRDRD WCVDLIPKFL MANGELTNIL VHTDVTRYID FKQIAGSYVY RNGRIAKVPA
NEVEALRSNL MGLFEKRRMK RFLEFIQNYD EDTPSTHQGF NLDTNTMNEI YTHFGLENGT
KDFIGHAMAL WHTDDYLNDV ARPTYERIIL YVQSVAKHGK SPYLYPLYGL GELPQGFARL
SAIYGGTFML DTPIDEVLYD ETDGVKKFAG VVTKEGTAKA PIVIADPTYF PEKVKKTGAR
VIRAMCILEH PVPNTGDTDS VQIIIPQNQV GRKHDIYIAV VSDVHCVVPK GYYLAIVSTI
IETDAPHIEL EPAFKLLGPR IDTLMGITEI YEPINDGTAD GIYISKSYDS SSHFESTTDD
VKDLYFRITG KPLVLKKRST TEEESQDEAT IGGL
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