Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_90304 |
Symbol | |
ID | 4839968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 474024 |
End bp | 475010 |
Gene Length | 987 bp |
Protein Length | 256 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391283 |
Product | predicted protein |
Protein accession | XP_001385778 |
Protein GI | 126138510 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.156537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.643856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AAAAACTTCA TTGAAAAAAT TTAACTACGT CTTTTTCGTT TTGAAGGTTT TGAACACACA ACACCTATAA CGTATATATC AATATGGCTG TCGGTAAGAA CAAGAGATTG TCCAAGGGTA AGAAGGGTTT GAAGAAGAAG GTCGTCGACC CATTCACCAG AAAGGATTGG TTTGACATCA AGGCCCCATC TACCTTCGAA AACAGAAACG TTGGTAAGAC CTTGATCAAC AGATCCACCG GTTTGAAGAA CGCCGCCGAT GGTTTGAAGG GTCGTGTTGT CGAAGTATCC TTGGCTGACT TGCAAGGTTC CGAAGACCAC TCCTACAGAA AGATTAAATT GAGAGTTGAC GAAGTCCAAG GTAAGAACTT ATTGACCAAC TTCCACGGTT TGGACTTCAC TTCCGACAAG TTAAGATCCT TGGTCAGAAA GTGGCAATCT TTGGTTGAAG CCAACGTCAC CGTCAAGACC TCTGACGACT ACGTCTTGAG AGTCTTCGCC ATTGCCTTCA CCAAGAGACA AGCCAACCAA ATCAAGAAGA CTACCTACGC TCAATCCTCC AAGTTGAGAG AAGTCAGAAA GAAGATGATC GAAATCATGC AAAGAGAAGT TTCCAACGTC ACCTTGGCTC AATTAACCTC CAAGTTGATC CCAGAAGTCA TTGGCCGTGA AATTGAAAAG TCCACTCAAA CCATCTTCCC ATTGCAAAAT GTCCACATCA GAAAGGTTAA GTTGTTAAAA CAACCTAAGT TCGACTTGGG TGCTTTGTTG GCCTTGCACG GTGAAGGTTC CACCGAAGAA AAGGGTAAGA AGGTCAACGC CGGCTTCAAG GATGTTGTTT TAGAATCTGT TTAAGTCCGC TAGTGATTTT ACTTCTCAAT TGTATTTTGT TAGACTTGAT CAAGAGAGGG ATACAAGTAG ACTTTTTATT AATTATAAAA TAGCATGTTA AATATAAAAC AAATTTCAAT ATAAACTAAT TTACTAG
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Protein sequence | MAVGKNKRLS KGKKGLKKKV VDPFTRKDWF DIKAPSTFEN RNVGKTLINR STGLKNAADG LKGRVVEVSL ADLQGSEDHS YRKIKLRVDE VQGKNLLTNF HGLDFTSDKL RSLVRKWQSL VEANVTVKTS DDYVLRVFAI AFTKRQANQI KKTTYAQSSK LREVRKKMIE IMQREVSNVT LAQLTSKLIP EVIGREIEKS TQTIFPLQNV HIRKVKLLKQ PKFDLGALLA LHGEGSTEEK GKKVNAGFKD VVLESV
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