| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90276 |
|---|
| Symbol | |
|---|
| ID | 4839971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 485476 |
|---|
| End bp | 487525 |
|---|
| Gene Length | 2050 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640391286 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385781 |
|---|
| Protein GI | 150866249 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.570424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AATCCGTCCA ATTGCCAAAC TGATTCTGGG CAAAAGCGGT AGTCTTTACA GATTCGCGAT
TTTCATAAAC AGCAACAAAG AATAGAAAGA AGAGATTAGC AGAGCGTTTC CAGATAATCA
ATACAGATAA CAGAAAGGAC AGAATAGAGC GACGTAGGCC TATTTTGACA AGGAAATCTC
ACAGTACAAG TAGCATAATA CAATTCAACT ACGTAACGCT ACCATAAACA CACAATCACC
ATACAATAGT CTATTACCAC ACAATAACAA TACATACTAT GTCTCAACAG GAGGCTATCA
ACAACGCGAA TCAGATCAGC AATGCTCTCA ATGCGCTCCA GCAGAAGAAT CCCAAACCAA
AACGGGACTT GTCCATCTAC GTTATGGAAG ACGGAACGAC AATTAACACC CAGGAAAGAG
CCATTTCTAC CATAGAGCCT CCGGCCACAT TCAAGCCTAC TGATGAACAG CTTTTCTTGC
CCAATGGATT GCCCAACTGT GCTTTTCTCA AGGACCATTT TTTCCGCGAG GGTAGACTTC
ATGAGGAACA GGCGATTAGG ATCGTCAGAG CTGCTACAGA GCTCTTGCGA AAGGAGCCGA
ATATGCTCCA TGTGCCTGCT CCTGTAACAA TATGTGGCGA CGTCCATGGA CAATACTACG
ATTTGATGAA GCTCTTTGAA GTCGGAGGCA ATCCAGAGAG TACGGCGTAC TTGTTCCTAG
GCGACTACGT TGACAGAGGC TCGTTCTCCA TCGAATGTCT TGTTTACTTA TATGCATTGA
AGTTGAACTA CAATCTGAGC TTCTGGATGT TGAGAGGTAA CCATGAATGC AAGCATTTGA
CTGAGTATTT CACATTCAAG TCTGAATGCT TGCACAAGTA CTCTGCCGAT TTATATGAAG
AATGTTTGGC ATCGTTTAAC GCCTTGCCGT TGGCTGCGAT CATGAACAAC CAGTTCTTTT
GTGTCCACGG AGGTTTGTCT CCAGAGTTGA AGACACTTGC CGACTTGGAG CGACTTGATC
GTTTCAGAGA ACCACCCACA AAAGGGCTTA TGTGCGATCT CTTATGGGCT GATCCCACAG
AAGAGTACGA TGAAGACAAT ATGGACCAAA CGTTTGTCAG AAACACCGTT CGTGGCTGTT
CCTACGCATT TACATACAAG GCATCATGTC AGTTCTTGGA GCGAACGGGC TTGCTCTCAG
TGATCAGAGC CCATGAGGCC CAGGATGCTG GCTACAGAAT GTATAAGCGA ACAAAGACTT
TAGGATTCCC ATCTTTGTTG ACGATGTTTT CTGCTCCAAA CTACTTGGAC ACATACAACA
ACAAGGCTGC AGTTCTCAAA TACGAGAATA ACGTGATGAA CATCCGTCAA TTCAATGCAT
CACCTCATCC CTATTGGCTT CCGCATTTTA TGGACGTATT TACGTGGTCG TTACCGTTTG
TTGGTGAGAA AGTTACAGAC ATGTTGGTTT CGATATTGAA TATCTGTACT GAAGAAGAAT
TGGACGAAGA GACCCCGTTG GCCGAAGAGG CTATCACGCA GAATGTTAGC GCTGTCTCCA
CAAATCCAGG ACAAGCACCA GGAGCGGTAT CACTGGTACA GACTAATCCT CCTACTACAG
TGCAAGAGGA CGATTCTCTC GATGCCAAAA AGCTCGCATT ACGTAATAAG ATCATCGCTA
TAGGCAGAAT CTCGAGAATG TACCAAGTAT TGAGACAAGA ATCTGAGAAC GTTGCACATT
TGAAAGAGTT GAACAGTGGG TCACTTCCTA AAGGCTCATT GTTGAATGGT GCTGATGGTT
TGAAGAAGAC CATCACCAGT TTCGAAGAAG CCAGAAAAGC TGACTTAGTC AATGAAGCTT
TACCACCAAC TGCTGAAGAG TTCAGAAAGA TAGAAGAAGA ACGTGGAGAG AGAGCCAAGC
GTGAGATTGA GAGGAACGAC AACCCCAGTC CTGTTTTTCT GAGGTTGATC AGAAGGTTGT
CGTAGAGGCA TTTTTATACT CGTATTTATT GCAGTTGTCA TATAGACGTC ACGAGAAATG
AATTGTAGTG
|
|---|
| Protein sequence | MSQQEAINNA NQISNALNAL QQKNPKPKRD LSIYVMEDGT TINTQERAIS TIEPPATFKP
TDEQLFLPNG LPNCAFLKDH FFREGRLHEE QAIRIVRAAT ELLRKEPNML HVPAPVTICG
DVHGQYYDLM KLFEVGGNPE STAYLFLGDY VDRGSFSIEC LVYLYALKLN YNSSFWMLRG
NHECKHLTEY FTFKSECLHK YSADLYEECL ASFNALPLAA IMNNQFFCVH GGLSPELKTL
ADLERLDRFR EPPTKGLMCD LLWADPTEEY DEDNMDQTFV RNTVRGCSYA FTYKASCQFL
ERTGLLSVIR AHEAQDAGYR MYKRTKTLGF PSLLTMFSAP NYLDTYNNKA AVLKYENNVM
NIRQFNASPH PYWLPHFMDV FTWSLPFVGE KVTDMLVSIL NICTEEELDE ETPLAEEAIT
QNVSAVSTNP GQAPGAVSSV QTNPPTTVQE DDSLDAKKLA LRNKIIAIGR ISRMYQVLRQ
ESENVAHLKE LNSGSLPKGS LLNGADGLKK TITSFEEARK ADLVNEALPP TAEEFRKIEE
ERGERAKREI ERNDNPSPVF SRLIRRLS
|
|---|
| |