Gene PICST_90237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90237 
SymbolKSP2 
ID4840113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp172453 
End bp175480 
Gene Length3028 bp 
Protein Length816 aa 
Translation table12 
GC content40% 
IMG OID640391428 
Productserine/threonine protein kinase 
Protein accessionXP_001385725 
Protein GI150866211 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.5842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGCTAACGTT CTCTAGCGCA CCGTGATCTC ATAGTATACT CCAGCAATAA AACCCAAAAA 
AGAACTACTT CGGCTTATTA TCGTAAACCG ACACTCATTC ATAATAAAGA CTATACTAGT
CTATAAATCC ACAATAGCCT ATTGACTATT CGTTAACAGC AGTCATTGGC TTTCAATTAG
TCATAGCCAT CAACTACCGC AAACTATTTT ATTTATAACT GTTAACAGTC ACTTGCATAG
TCTTTCTACT CAAAATCTGC ATAAAATCAT ATTTCTTTCC TATTTCCACA AACCCTACGA
TTACCTTCTT CACTATATGT CCCACTAACG AAATTGATAC TAGTCATATT TATTGAAATT
CCATTACGAT TTGCATAGTT CTCCTACGAT ATTACCATTC TATTTTTATC TGACAAACGA
CCTTATTTAT TTGAAACATA ATCTTTTGTT TATTTACAAT TCTTCTGCTA CTTTTCCATT
CTAGACTACA TTTCTTACAA TATGATGGAA GAGTATAAAC AATATGACAG AGGTGGCTTG
TTGAGAGAAA GATACCACAA GGTCAATGAC ATCAGTGAAG GCTCATACGG GCTCGTCTCG
GTCGCCAAAG ATACAAAAAA CAACAACAAG TTAGTTGCTG TCAAGTTCAT CTATCCAATT
GACTTCAAGA AAGACGCCAA GGATGAAAAG ACCTCCAGAC CTTCTTCCAG TCCCGCAAAG
CTCAGATCAC CCAACCCTGT CTCTGCATCG AAGCCATCCA GAAACTCGAT TCTCACGGGT
TTGTATGAAG AAGCACAAAA AGAAATCAGG ATCCATAAAA TCTTAGGCAG TCATCCAAAT
GTTTCTTCTT TGTACGACCA CTTTGATTCA TATCTTATAT TAGAATATTG TTCTAGAGGT
GATCTTTATG AAGCGATTCA TGGTGGAAAT GGTCCTTCCA CCTCGCAGGA TATCAAGGAC
GTCTTCAGTC AAGTCTTGGG TGCCTTGGAG TATTGTCATT CGCACCAAGT TTATCATCGT
GATCTTAAAC CTGAAAACAT TTTGATTGCC GAAGACTGGA CCATCAAAAT TTGTGATTGG
GGTTTGGCAA CAACCACCAA AATCATCACC AACAAAGACG AATTCGATAT TGGATCTGAA
AGATACATGG CACCAGAGTT GTTTGACCCT GCTCTTGAAA GCTATGATGC TTCCAAAATA
GATCTTTGGT CTGTAGGTGT GATCTTGTTG ACATTAGTTT TTCACAAGAA TCCTTTTCAA
GTAGCCAACT ACTCCGATAA GAGATTCCTT CAATTTGTGA ACAACAGAGA AGCCCTTTTC
GATATCTTTT CCACAATGAG CGGCGACATG TTTTCCATCA CACGTTTCTG TTTGAACATT
GATCCAAGCA ATCGTGACTT GGCCAGTATC AAAAGTGAGT TAGAAACACT TCGCTACTTC
ACCATTGACG AGGAATATTG GGGTAGTGAA GAAGAGGAAG ACCTTGAAGA AGACTATGAA
TTCGAGATGG ATTCTGATTT CTACAAGAAA GACGCTACGC CTTCTCCTGA GAAGATCTCC
CCTATTGTAG TTACGGTAGA ATCCCAGGAC GATAAGAACT CTGGGGACAA GCACATTTCC
GAGTCGCTTT CGACGACCGA GTCTGAGTCG ATCCACTCAA AATCGTCCCA ATACCGTGTA
GGATTCCAGG AAGACAGAAT TCCTCATAAT CACAGAGCTG ACGCTCTTTT GTCTTCGAAT
ACAGAATTGA AGCCAATTCC TATTGGAGGC AAATTCATTC GCAACACCCG TAAACCATTC
AACGTTGCTT CTTATAATCA ATCTCACAGT AATGCCAGAT CCCTAAACAA CAAGTTCAAC
CGTGAGGATT TCTTTACTCC CAAATCTATT TATAATCACT ATATGGATAA ATATGGCGAG
CAAAGATTTG GAAACATTCA GAATGGTCAG AATGGCCAGA ACGGCCAGAA TGGAAGCAAA
AGTTTTCATG GACATCACAA TCACCATAGT GCGGATTGGA AGAAGAATAA GAGACCTCCT
CGTTCTTGGA AGAAACCGAA CAAGAGAAAG CCTCGGACCA GGTCTAATCG AAACCGTTAT
GGTGTTGAAA ACAATCATCA CCAGAATTCT AATCTGACTG ACTTGTCGAG CCAACAGGCT
TCTCAGAAGA AGAAAACTAG ACTGGCCTCT ACTTCAAAGT TGCGTAGAAG CTTCATTCCG
CCAAGTGCTG GAAATTCATT GACAAACAGC TTCCATAACC TTGCTCATCC AATGGGACCT
CAATCTTTAG GCTCGTCTGC AACATCTACT GGTAAGTACG TACCACCTTA TTTGAGATCT
CCAGCATATA CAAAGTCACC AGTAATAGAG CCTCTTACTG AGGAAATTGA CCGCCTAACT
TTAGCAAATG ACTACGATGA GGTTTTCCAT TTGGAGGATG ACTTTGAATT AGAAGCAGTT
GACGAACCAG AAACTACCTT AGCAGAAAAG ACAGAACGCC CGACCACAAT TGATGACATT
CTTTTCAGGA AACCAAACTA CAGAGGACAA GGCGAAGCAG ATCCAATTAG AAATTATGGA
ATCATCTATA ATCACAGTAA CGGTAACGGA ATGGCGATTC AGAATGGCAT GATTACTGGA
AGAAGAAACT CTGCCCTAGG ATCGTCTCAT AAGAGACCTG CTTCAAATCC GATTCTTGAA
TCTCAAGTGT TGTCTACGTC TGCTGGTAGT GGTTCTGGAA AGTATGTCCC TCCATTCAGA
AGGGGATCGC ATTCTGCTGT TGCCAGTAAC GGTAAACCTC TCAAGGTTGT TGATAAGAAA
GATGAAGGCT ACATCCATGG AAAATTACTT TCCAGTCCAC TCGTTGAAAT TAATAACTAC
ACAACCAATT CTGTTCCTGT AAATGGGAGA GAATGGTTTG ATTATAAGAA AGACTGGAGT
GATTATGATT AGTATTGATG TTGTTTCGAT CACTAATTAA ATTTCACATT CATATTTCTA
TGTAGTTTTA AATACACACA AAATCATT
 
Protein sequence
MMEEYKQYDR GGLLRERYHK VNDISEGSYG LVSVAKDTKN NNKLVAVKFI YPIDFKKDAK 
DEKTSRPSSS PAKLRSPNPV SASKPSRNSI LTGLYEEAQK EIRIHKILGS HPNVSSLYDH
FDSYLILEYC SRGDLYEAIH GGNGPSTSQD IKDVFSQVLG ALEYCHSHQV YHRDLKPENI
LIAEDWTIKI CDWGLATTTK IITNKDEFDI GSERYMAPEL FDPALESYDA SKIDLWSVGV
ILLTLVFHKN PFQVANYSDK RFLQFVNNRE ALFDIFSTMS GDMFSITRFC LNIDPSNRDL
ASIKSELETL RYFTIDEEYW GSEEEEDLEE DYEFEMDSDF YKKDATPSPE KISPIVVTVE
SQDDKNSGDK HISESLSTTE SESIHSKSSQ YRVGFQEDRI PHNHRADALL SSNTELKPIP
IGGKFIRNTR KPFNVASYNQ SHSNARSLNN KFNREDFFTP KSIYNHYMDK YGEQRFGNIQ
NGQNGQNGQN GSKSFHGHHN HHSADWKKNK RPPRSWKKPN KRKPRTRSNR NRYGVENNHH
QNSNSTDLSS QQASQKKKTR SASTSKLRRS FIPPSAGNSL TNSFHNLAHP MGPQSLGSSA
TSTGKYVPPY LRSPAYTKSP VIEPLTEEID RLTLANDYDE VFHLEDDFEL EAVDEPETTL
AEKTERPTTI DDILFRKPNY RGQGEADPIR NYGIIYNHSN GNGMAIQNGM ITGRRNSALG
SSHKRPASNP ILESQVLSTS AGSGSGKYVP PFRRGSHSAV ASNGKPLKVV DKKDEGYIHG
KLLSSPLVEI NNYTTNSVPV NGREWFDYKK DWSDYD