| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90190 |
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| Symbol | |
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| ID | 4839830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1023276 |
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| End bp | 1025332 |
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| Gene Length | 2057 bp |
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| Protein Length | 569 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391145 |
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| Product | predicted protein |
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| Protein accession | XP_001385888 |
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| Protein GI | 126138730 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.419732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTTCCATA CCCAGTGGAA CTTGCAATTC TTGTTCAACC AACAGTCCGT CTGTAGATAG
TACATAGAAA TATTAACACA ATGTTGAGAG CCAGTCGTCC AACCGTGAGA AACGCTACCG
TTTCGTTTGT TCGTCATTTG TCGCATAAGG AATTGAAGTT CGGAGTTGAA GGAAGAGCTG
CCTTGTTGAA GGGTGTCAAC ACTTTGGCCG ATGCCGTTTC CGTGACTTTA GGACCAAAGG
GTCGTAATGT TTTGATTGAA CAACAGTTTG GTGCTCCTAA GATCACCAAG GATGGTGTCA
CTGTGGCCAG ATCAATTACC TTGCAAGACA AGTTTGAAGA TATGGGAGCC AAGTTGTTGC
AAGAAGTCGC TTCCAAGACC AACGAAAGCG CCGGTGACGG TACCACTTCT GCTACCATCT
TGGGTAGATC TATCTTTACC GAATCCGTTA AGAACGTTGC CGCTGGCTGT AACCCAATGG
ACTTGAGAAG AGGATCTCAG GCCGCTGTGG AGGCTGTGGT TAACTTCTTG CAACAGAACA
AGAAGGAAAT CACCACTTCT GAGGAAATCG CTCAGGTTGC CACCATTTCT GCTAATGGTG
ATGAACATAT CGGTAACTTG TTGGCTTCGG CTATGGAAAA GGTTGGTAAG GAAGGTGTCA
TCACCGTCAA GGAAGGTAAG ACTTTGGAAG ACGAGTTGGA AGTCACCGAA GGTATGAGAT
TCGACCGTGG TTTCATTTCT CCTTACTTCA TCACCAACAC CAAGTCCGGC AAAGTCGAAT
TCGAAAACCC TTTGATCTTG TTGTCGGAAA AGAAGATCTC TTCCATCCAA GACATCTTGC
CATCTTTGGA ATTGTCCAAC CAAACCAGAA GACCCTTGTT AATTCTCGCT GAAGACGTCG
ATGGTGAGGC CTTGGCTGCT TGTATCTTGA ACAAGTTGAG AGGACAAGTT CAGGTCTGTG
CCGTCAAGGC TCCTGGCTTT GGTGACAACA GAAAGAACAC TTTAGGTGAC ATTGCAATCC
TCACTGGTGG TACTGTTTTC ACTGAAGAAT TGGACATCAA ACCAGAAAAC GCCACCGTCG
ACTTGTTGGG TTCTGCTGGT TCTATTACTG TCACCAAGGA AGACACCGTT GTCTTAAACG
GTGAAGGTTC AAAGGACAAC ATTGCCGCTA GATGTGAACA GATCAGAGTC TCTGTGGAAG
ATGCTCTTAC CACCGAATAC GAAAAGGAAA AGTTGCAAGA AAGATTGGCC AAGTTGTCTG
GCGGTGTTGC TGTCATCAAG GTCGGGGGTT CTTCTGAAGT CGAAGTAGGT GAAAAGAAGG
ACCGTTATGA CGATGCCTTG AACGCTACCA GAGCTGCTGT TCAGGAAGGT ATCTTGCCAG
GTGGAGGTAC CGCCTTGATC AAGGCTTCGA GAATCTTGGA CGAAGTCAAG GCTAATTCTG
CTAACTTTGA CCAAAAGTTG GGTGTTGAAG CTATCAAGGC TGCCATCACT AAGCCAGCCA
AGAGAATCAT CGAAAACGCT GGTGAAGAAT CGGCTGTTAT CGTCGGTAAG ATCTATGACG
ACTTATCCTT CAACAACGGT TACGATTCCG CTAAGGGCGA GTTCACTGAC ATGATTGCTG
CTGGTATCAT TGATCCATTC AAGGTTGTCA AGAACGGTTT GGTTGACGCC AGCGGTGTTG
CTTCTTTGTT GGCCACTACC GAATGTGCTA TTGTCGATGC TCCAGAACCA AAGGGTGCTC
CAGCCGCTCC ACCAGCCGGT GGTATGGGTG GTATGCCAGG TATGTTCTAA ACGGAATGAC
TGAGCCATTG ATGAATTTGA CGTTTAAGCA TAAAGAATGA AAATGACATT TACTGTACAG
AGAACAGAGT TTGACAGCTT GTTGTTGTCG TCTCCTAGCT CTATATCTAT TTTATTGTAT
ATAGTCTTAA TTAGTATAGA GTTTCTGCAA TCGTTGTAGT TCATATTGTA CTTGTTAACT
AAGGTGTGCT AGAAATGCGC ACTATCTGAT GAGCATCGAA TTTATTTCTG AAATTTAATA
TATACAATCT CTTCTTT
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| Protein sequence | MLRASRPTVR NATVSFVRHL SHKELKFGVE GRAALLKGVN TLADAVSVTL GPKGRNVLIE
QQFGAPKITK DGVTVARSIT LQDKFEDMGA KLLQEVASKT NESAGDGTTS ATILGRSIFT
ESVKNVAAGC NPMDLRRGSQ AAVEAVVNFL QQNKKEITTS EEIAQVATIS ANGDEHIGNL
LASAMEKVGK EGVITVKEGK TLEDELEVTE GMRFDRGFIS PYFITNTKSG KVEFENPLIL
LSEKKISSIQ DILPSLELSN QTRRPLLILA EDVDGEALAA CILNKLRGQV QVCAVKAPGF
GDNRKNTLGD IAILTGGTVF TEELDIKPEN ATVDLLGSAG SITVTKEDTV VLNGEGSKDN
IAARCEQIRV SVEDALTTEY EKEKLQERLA KLSGGVAVIK VGGSSEVEVG EKKDRYDDAL
NATRAAVQEG ILPGGGTALI KASRILDEVK ANSANFDQKL GVEAIKAAIT KPAKRIIENA
GEESAVIVGK IYDDLSFNNG YDSAKGEFTD MIAAGIIDPF KVVKNGLVDA SGVASLLATT
ECAIVDAPEP KGAPAAPPAG GMGGMPGMF
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