Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_90151 |
Symbol | GON1 |
ID | 4839928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 517980 |
End bp | 520210 |
Gene Length | 2231 bp |
Protein Length | 680 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391243 |
Product | possible rho-like GTPase involved in secretory vesicle transport |
Protein accession | XP_001385448 |
Protein GI | 150866000 |
COG category | [R] General function prediction only |
COG ID | [COG1100] GTPase SAR1 and related small G proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.907201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCCAATGTCG CAAGACACGC TTAGAGTGGT AGTATGCGGA GACGACACTG TAGGGAAGTC GTCCCTCGTA TCGTCACTAA TAAAAGAAAC AATTATCACG GAGCAAGAAG TACTTCCACC TATAACAATA TCTGGAGACG ACTATACCAA CAGTTTTCTG GAATATGCCT CGAGCACTGA GGGCAAGAGC TCCAAGAAGT CCCGAAAACA TCCACTGAAG AAAGATGAAT CGTTGCAGAA GTTCAATGAG ACTGGAATGA AGTTGGTACT GAAATATATA CCTAACAAGA CAGTGATAAT AGATACAATA TCGTCTGACA TGGTACAACT ACAAAAGGAA TTGAAACGAG CCGATGTTAT TTGGCTTGTA TATTCTGACC ACTATACGTA TGAAAGAATC TCATTGCACT GGATGCCGAT GTTCAGATCT ATGGGAGTCA ATTTGCCCAT AGTGTTATGT GCCAACAAAT CTGACCTTTT GCCAAAAGAC ACTTTAAAGA CTCAGAACAC TGACGAGTTC ATTCCGTTGA TCCATGAGTT CAAGGAAATA GAAGCCTGCG TGAGATGTAG CGCTAAGGCC AATTACAACG TAGTGGAGGC CTTCTATCTA TGCCAAAGAG CGATCACCCA TCCCATTTCG CCTATTTTCG ACTCTAAAGA AGGCAATTTA AAACCATCAG CTATCGCTGC ATTGAAGAGA GTCTTTTTCC TTTGTGACAA GGATCAAGAT GGACATCTAA ATTTTGAAGA ATTATCTGAT TTGCACAAAA AGTGCTTTGG AAAGCTGGCT ACCCAGGCAG AATATGACGT GATAGTAAAA ACCCTAGACC AGAGGATATA CCCAGACCTC TCTTCGGGAA GTACAGGCAT CTCTGAAGAT GGATTCATTT TACTTAACAA GATTTACGCT GAAACTGGCA GACACGAAAC GATATGGGGC ATATTGAGAG CTTACCACTA TACAAACTCA TTGTCTTTGA ACGATAGATT CTTGTTTCCA AAACTAGACG TAAATCCCAA CTCAAGTGTA GAATTGAGTC CAACAGGGTA TCGATTTCTT GTTGACTTAT TCTTGAAATT TGACAAAGAC AATGATGGTG GACTTAACGA AGAAGAGCTC AACAACTTGT TCCGACCTAC TCCTGGAATT CCCAAGCTCT GGCAAGAGTC CAACTTCCCA TCTTCCATAG TTTGTAATGA GGCAGGATAT GTAACATTGC AAGGATGGTT GGCACAATGG AATTTGACCA CTTTTTTGGA CTACAAGGCA ACATTGGAGT ATTTGGCATA TTTAGGGTTC GATGAAGATA TTTCAGTCAA GGCATTGAGA ATCACCAAGC CTCGTAAGAG AAGACAGAAA CAAGGTAAAT TCTACAGACA GAACGTCAAT GATAGAAACA TATTCAACTG TTTCATCTTA GGAGCACCTA AGTCAGGAAA AAGTTCCCTT CTTGAACTGT TCTTGCGTGG ATCATACAGT GAAACATATT CGCCCACCAT TAAACCTCGA TTGTGTATCA AAGATATTGA ATTGAGAGGG GGAAAACAGT GCTACTTAAT TCTCGAAGAG CTCGGAGTCC ACGAGTCTGC CATCCTTGAA AACAAACTGA GGCTAGACCA GTGTGATGTC ATATGCTATG CTTATGATTC TTCCGATCCA GAACTGTTTC AATATCTTGT TGAATTACGA GATAAGTATT CTGTCTTGCT TGACGAGATT CCTTCGGTAT TCGTAGCCCT TAAAGCCGAC TTAGATAAAC AACAGCAGAG ATCAGATGTG CAGCCAGAAA ACTACACTAG AGACCTATAT CTTGGGTCCC CACTACATAT TTCTTCTGCT TGGACTACTT CTTTACACGA ACTATTTATT CAACTAGTAG ATGCGGCTAA GATGCCAAGT ACAGCTACGC CGGGTCTAGA AAGCGAACCG GATTTTACAG ACCAGGAGAA TTTCAAACAC CTTGTCATGG CAGGAGGAGC GGTAACTGTC ATGACCATAG TGTCAGTATG GATCTGGCGG AGTTCTGTAC AAAGTTCCCG AATCTAGGAA ACCATATCAG CTGCACATAC TTTATAGTGG AACCTGCGCG ACATGCACGA CATCCCGAAA TTTTTCTGCG ACAAAGATTT TTTTTTGAAC CTCATCCCTC TATAGAAGTG AAAAATCGAA TTCAATCACT AGAGGTTCAT ATCTAGACTC ATACCAAAAT AGCTAGTTAA CACGATGTCT G
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Protein sequence | MSQDTLRVVV CGDDTVGKSS LVSSLIKETI ITEQEVLPPI TISGDDYTNS FSEYASSTEG KSSKKSRKHP SKKDESLQKF NETGMKLVSK YIPNKTVIID TISSDMVQLQ KELKRADVIW LVYSDHYTYE RISLHWMPMF RSMGVNLPIV LCANKSDLLP KDTLKTQNTD EFIPLIHEFK EIEACVRCSA KANYNVVEAF YLCQRAITHP ISPIFDSKEG NLKPSAIAAL KRVFFLCDKD QDGHLNFEEL SDLHKKCFGK SATQAEYDVI VKTLDQRIYP DLSSGSTGIS EDGFILLNKI YAETGRHETI WGILRAYHYT NSLSLNDRFL FPKLDVNPNS SVELSPTGYR FLVDLFLKFD KDNDGGLNEE ELNNLFRPTP GIPKLWQESN FPSSIVCNEA GYVTLQGWLA QWNLTTFLDY KATLEYLAYL GFDEDISVKA LRITKPRKRR QKQGKFYRQN VNDRNIFNCF ILGAPKSGKS SLLESFLRGS YSETYSPTIK PRLCIKDIEL RGGKQCYLIL EELGVHESAI LENKSRLDQC DVICYAYDSS DPESFQYLVE LRDKYSVLLD EIPSVFVALK ADLDKQQQRS DVQPENYTRD LYLGSPLHIS SAWTTSLHEL FIQLVDAAKM PSTATPGLES EPDFTDQENF KHLVMAGGAV TVMTIVSVWI WRSSVQSSRI
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