| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90087 |
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| Symbol | SIP3 |
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| ID | 4840369 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 800969 |
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| End bp | 805078 |
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| Gene Length | 4110 bp |
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| Protein Length | 1238 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391684 |
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| Product | Snf1p protein-interacting protein |
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| Protein accession | XP_001385516 |
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| Protein GI | 150866047 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAATTATATA CTATCAATTG CGGTTCTAAC AGAATCTAGT ATCAGTTTCG TTTCCAATTT
GTTTGCTGAA ACTAAAATTG AAATTGAAAT TGATTGCAAA TCTGCAAGCC TCAGCTCCAC
TCCGAAAAGA TCATATCGTT TGAGCAATTT AACCTCGTTC CCATAGACTG TTAGAAACAT
TTACTTCAAC ACCTTATAAT TTTCTGCTCC TACTTTCATA TTTATTTATT GTCAATAACT
CAATGCAGCT GCCATTAGTT GTGCCCTCTT CTACTGCTAA TGGGAATAGT AAGAATCCAG
CTAAGCAGCC CACCAGTAGT GATGGACCAG AACCGTCCAA GACCCCAAAA CCCACAGTAA
ACGATGGCAA CAAGCAGGAA CAGACTTCCT CGCAGCAAAC ACTGAGAAGC GGACCTCTCG
CAGCAAAGCC AACAAGACAA TTCAAATTGA TCTCTGTAAA CTTCAAAGAG GCATCGTTGG
ACTCCCCCAG CTTCCGTGCA ACTATCAATC ATCTCGATAC CCAAGTGGTC AACATTGAAA
AGTGGATATT GGCTCTTTCA AGTTCAATCA GAAAGATACC CTCGTATATC AAAGAAGTCC
AGTCATTCTG CAATTCATTC CTTGAGCATT TGGTGCCGTC GTTCATCCAG GATGGGCTTA
TTGATCAGGA GTATACCGTA CAATCATTGA ATACAACCTT ATCTGGGTTG AAAAAACTCT
GGGCTATCAG TTTGAGCTCG TTAAATGTCA ATACATATAC TATTGATAAC ATCAGAACTG
TTGTTTCTAA AAATGTTGCA TATTACAAAG AATTGAGAGA GAAATTCGAT GCCAGCCAAC
AGAAATACGA TAAGTACTTG GAAATCTACG TCTCCACATC TAAGACAAAA GACGTGGCTA
TGGCAATGGA AGATGCCAAG CAGTTACATG TTGTCCGTAA AGAGTATCTT CATGCTTCAT
TGGATTTGAT CATTGAATTG TCAGCATTGG GAAATCATTT GGATAAGGTC CTTGTCAACT
TGAGTTCTGA TTTGTGGAAG TACAAGTTCT CGTATATCAC AAACGATGCT CTAGATCCAT
TTTTCAAAGA ACAGTATTCA AAGATTCAAA AGATCCAAAG CTGGAGCGAC TCCTACTCTG
TTGCTATTGA TAAGTTGCAA ACAGATATGC AAGCTGCCAG AGCCCACGTT GAAGAAAGCT
CGGGTATACA ATTCACTCCA TCTTCCAACC CTAATGACTA CTCAGCCAGC ATGATCAACT
CGCGTACTTT AAATGACATT GATGAAAGAG GCGTAGAGAA GCATGGTTAT TTGTTCATGA
AAACGTGGAA TGAAAAATCC AATAAACCAG TGTGGGTCAG AAGGTGGGCA TTCATTAAAG
GAGGAGTTTT CGGTATGCTC ATTCTTAGCA GCACCCAGAC GTTTGTCCAG GAGACTGACA
AAATGGGAAT ATTGCTATGC AATGTCAAGT ACGCTCCAAA TGAAGATCGA AGATTCTGTT
TCGAAGTTAA AACAAGCAAT ATATCTATAG TTTTCCAAGC AGAAACGTTG ATAGATTTGA
AGACTTGGTT GAAGGTGTTC GAAAACGAGA AAAACAGGAT CTTGTCAAGT GGAGAAGAAG
ATCAAAATAT ATTTGCTATT GCCTCGGGAA GATATCCTCC AATTGTGTCT GAATTCGCTT
CGACAATTAA TACTGTTGTA GACAAGGAAA TGACCAGCAC CAGAATCATA AACTCGTCAG
GTCAGATAAT CACTTCTAGT CACTTGTCGA GTCACATTGA AAAGAATGAA AAATTCTTTC
AGAAATATGT CTATCTGCAA ATACCCCAGA TTAGACCCCC TTTTATGACA GAAACGACCA
AGTCTTCAAT TATAGCATAT TCTCTAGCTT CTGCTACATC GCTCCCGACA GCGTTAACCG
CGAACATTTG GGGTTCTGTG AATTGGGGTT TGTACTATTT GCATGATGCT GTTGTGGATC
ACCTCCCACC TTCTTCTATC TCGATTCCAG AAGCAGAATT GATTGAGAAG CAGTTAACGC
ATAAAGATGA TTCAGGAAGT TTTTATCCCG TTTACTACCC GCATACATTA GTTGCAATGG
ATATTCAAAT GCGAGCATTG TTTGAAACAG CAGTTGAACC TGGTGAGTAC TGTTTAGTGT
CATTCCGCTG TATTTGGTCA CCGAACTCGA AACAAGAATT GAGTGGAAGA TGCTTCATTA
CTACACATCA TATTTATTTC TATATGCAAG CTCTAGGGTT TGTTGCCTTG TTTAAGGGCT
ATGTTGGAAA CTTGGTATCT GTCGATCATA ATGCTCAAAA GCTGTACGAT TTGTTAAAAA
TTTACAGTCT TGATGGAGTT ATAAAAACTA AATTATTTTT GGATGACGGA AAGCTCATCA
AACAAAAGAC AGTGTATCTA ATCAATAACC TCGCTAGCGA TAAACCCAAG AAACTTGCGG
AAGTTTTAAA AGATTTAGAG AGAATTGAAG TTCAAGTAAA AACGGAGCAA GACGATCAAC
TGCAGATTAA GCTTATTCAA ACATTGGCTA AGAATCTCAG TGACAGTGCA AAGGCAGAAA
AAGTGAACTT TGTGAATATA AATGGTGACA ATACAAACGG GGACAATTCT AACTCATTTA
TCCAAAGCAA GGATGGAAAA CTCTTGAAAT TTCAAATTGA TTTCAGGAGA GAATATGGGT
TCATAGGTGA AAAGACGTAT GACCTTGTTC CAAAGGCAAT ATTTCATGCC TTATTGGGTG
ACAATTCTGT AATATTTAAG GATCAAACAG CGTTCACTAC ATTGGAGTGT TTCATCAAGA
AACCTTGGAG AGTGGCTGAA AATGGAAATT ACTATAGATC TGTTAATGCA CCAGCAAATT
TTGGCAACAA ACAGGTCATA ATGAGACTTG ATCAAGTCAT AGACAATATT CACGACAACC
AATACTACAC TTTTACTCAT AAGAAATCAA CATTCAAATT TTTTATGGGG TCTAAGTTTA
GTATAACGTA TAAGTTTGTT ATTGTTGGGG TTGCCGGAAA GCAGTCAAAA GTTTACTTTT
ATTGCAAACG GGACTTTCAA GGCTATCATC CATTGAATTT GATTATTGAT CGGATCTCTA
TTCAAATTGC AAATAGCCAG ATTAATACTT TGGATAAGCG TCTTAAAGAT GTTGTTATGC
AGGTGGGAAA TCATGGTATG ATCGTGAAGG CTATTTATTT GTATGGTAAG TTGAGTCAAA
CTACTGTTCA AGATGAAATT GAAGAAGTTC CTGTCATTTA CTTCGGCCTT TTTAATTCTT
TAAAAGTAGT ATCAAAGAAA GTCTTTCATT CTGGAATCTC GTTTTTTATA TGGTTTGTTT
CTTATTTGAT CATGTCAGGC AAATATTTCT TGAGAAGTAT CAGAATGAAT CAGTTCTTGA
CATTGATCAC CATTTGTCTT GGACTTTTTA ACATATTTTT ATTAGGAAAG ACTTCAACGG
CATATTGGCA TTCCAGAATG GCAACACAAA TGGCATATGA ATTCGTTAAG AAGGAACCGG
TCATGTTGCA ACGGGCCATT TATTTGAAGG ACATCCAGGA TTTGCTAAGC GACCATACCA
TATTTAATAA TTCGTCGCAT CCGTATTTAT TGGACGATAG TTCTAGATGT CTTGGTGCAT
TTAAAGAGAA GTCCTTTGTC TATAATTTGA ATGAACCAAC CTATTGGGAC GAATCTTACG
GCGACGAAGC AACAATGGAT GTTGCCAAGC ATTTGAAGAA CGAATTTCGC ACCATTGGTG
TTAAAAGACA TGAATTACTT GTACAATTAA GCATCTTGAG GAAAATGGAG GAAGAAATTG
CAAAGGCGGA GTGGAAGAAT TGGCTCATGA GTGAAGTACA GCGATGTGAG TTCATCTCTG
CGAACGTCAT ACGAAAGCTC GATGGAAGTG AACGAGAAGA TATAGATGCC GGGGTACAAT
CTATCCAGAA TTACTGTAAT GACTGCAGTG CTCATTTGAG CGCAGCCGAA CTTTTATAGC
ATTGTCTATA CTTTTTTATT TGTACTTAAC TAGAACCCTC TCTTTGAGAG ATTATTGGCT
ATGTCCAAAT ACAACGCAAT TGCATTGAAA
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| Protein sequence | MQSPLVVPSS TANGNSKNPA KQPTSSDGPE PSKTPKPTVN DGNKQEQTSS QQTSRSGPLA
AKPTRQFKLI SVNFKEASLD SPSFRATINH LDTQVVNIEK WILALSSSIR KIPSYIKEVQ
SFCNSFLEHL VPSFIQDGLI DQEYTVQSLN TTLSGLKKLW AISLSSLNVN TYTIDNIRTV
VSKNVAYYKE LREKFDASQQ KYDKYLEIYV STSKTKDVAM AMEDAKQLHV VRKEYLHASL
DLIIELSALG NHLDKVLVNL SSDLWKYKFS YITNDALDPF FKEQYSKIQK IQSWSDSYSV
AIDKLQTDMQ AARAHVEESS GIQFTPSSNP NDYSASMINS RTLNDIDERG VEKHGYLFMK
TWNEKSNKPV WVRRWAFIKG GVFGMLILSS TQTFVQETDK MGILLCNVKY APNEDRRFCF
EVKTSNISIV FQAETLIDLK TWLKVFENEK NRILSSGEED QNIFAIASGR YPPIVSEFAS
TINTVVDKEM TSTRIINSSG QIITSSHLSS HIEKNEKFFQ KYVYSQIPQI RPPFMTETTK
SSIIAYSLAS ATSLPTALTA NIWGSVNWGL YYLHDAVVDH LPPSSISIPE AELIEKQLTH
KDDSGSFYPV YYPHTLVAMD IQMRALFETA VEPGEYCLVS FRCIWSPNSK QELSGRCFIT
THHIYFYMQA LGFVALFKGY VGNLVSVDHN AQKSYDLLKI YSLDGVIKTK LFLDDGKLIK
QKTVYLINNL ASDKPKKLAE VLKDLERIEV QVKTEQDDQS QIKLIQTLAK NLSDSAKAEK
VNFDGKLLKF QIDFRREYGF IGEKTYDLVP KAIFHALLGD NSVIFKDQTA FTTLECFIKK
PWRVAENGNY YRSVNAPANF GNKQVIMRLD QVIDNIHDNQ YYTFTHKKST FKFFMGSKFS
ITYKFVIVGV AGKQSKVYFY CKRDFQGYHP LNLIIDRISI QIANSQINTL DKRLKDVVMQ
VGNHGMIVKA IYLYGKLSQT TVQDEIEEVP VIYFGLFNSL KVVSKKVFHS GISFFIWFVS
YLIMSGKYFL RSIRMNQFLT LITICLGLFN IFLLGKTSTA YWHSRMATQM AYEFVKKEPV
MLQRAIYLKD IQDLLSDHTI FNNSSHPYLL DDSSRCLGAF KEKSFVYNLN EPTYWDESYG
DEATMDVAKH LKNEFRTIGV KRHELLVQLS ILRKMEEEIA KAEWKNWLMS EVQRCEFISA
NVIRKLDGSE REDIDAGVQS IQNYCNDCSA HLSAAELL
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