| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84869 |
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| Symbol | |
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| ID | 4840146 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1442270 |
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| End bp | 1444418 |
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| Gene Length | 2149 bp |
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| Protein Length | 437 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391461 |
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| Product | predicted protein |
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| Protein accession | XP_001385973 |
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| Protein GI | 150866392 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5243] HRD ubiquitin ligase complex, ER membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GCTGAATATA CAATTTAGGC TGGATATATA CTGCTTAGAG CAAAGGTTGC GAAGAAACCG
CATAAGGTCG ATAAAAGAAA TTCGGTCGTA TCTGAACATA TCAGCATCTC AGTCTTAATC
TATAAGCTTA CAAACACAGA GTATAGTTAC AATTAAGAAG CACGACTTGA TTGTTCACAT
TGATGGCCAC TTTAGAGTCG TCACTACCAT AGATCACGCT GAAGAAGTTC ATCGTGTGAT
TTCTACAACA ATACGAAATT TACAACTATT TCAATAGTGT CAAGCACTGC GTTAACCTGA
AAATCCGCAA TTCACCTTGT CTTCAACCTT GTATCCATAT ATTGAAGTGA AAGCTTCAAT
AATTCAATTA GACCCGCCAA AGTACAGATA AACACTATAA CAATATAAAT CGGTCTACCC
TTTATTTCCT ATTCTGATAA TCTCACTCAA ACATCACTTT CATATGGATC CTGCTTTTCT
TGAAACGACT GTCATGAACT TGGACGTAGA CTCAGCCTCC AATGTAGACA TGCAATGGCT
CCGCAACATG TTGGACAGAG CCCTAACAGC TAGCGGGTTG CTTCCACAGA GAAAGCTGGC
ATCTGAAGAG GCTATAGACA GTTTGATAAG TGTAGATTTG GAGACATTGG ACGAAAAGGA
CTGTCCCATC TGCTATGATG CGTATTCTGA TCCACACAAA AATGAGTCAG ACAGTGAAAA
CAGCATTGAC CATAGCAGAG GAGGCAAAAC TCGCCGCTCC GGTAAGTTGT GCAAGGACAA
AGAATCCATT GCCCAGATCG TGGAGCAAGA CCTAGAGCTT TGTGATTTGC TTGGAAATCA
GGACATAAAG CAGGAAACAA TTCAGAAGAA ACAGCAGTTC ACCGATCCAT CGTTATTCAT
GCCTGTAGAT GAAACTTCGC TGAATTATAT CCGTTTTCCT ACAAGAAACC TTGTAACTTT
TGAGGAGGCT AATGCAGACG ATTACTTTCC TGGCTATGTA GACGAAGCCA AGGCAGATGG
AGAAAAGAAA CGAAGACTTG ACGAAGCTAA GGCAGAGGGC CATGTACCTG TCAAAATGCC
AAGCTGCGAT CACGTTTTTG GCAAGCCGTG CATTGTGGAA TGGTTGAAAT CGAATGTGAG
TTGTCCCTTA TGTCGTAAAG AAGTCAAATC AGCACAGGAG GAAAACTCCA TTTCTGCGAG
AAGAGTCGCT GAGGTTGCAG ATAATATTCT GTCTAACTTT AACGATCGCC AAGGTGCTAT
TAGCCAGATT GTGGACCATA GCACTGATGT GTTCAACCCA TACAGAAGAC CGTTCAGTTC
CGCAATTACA CCACTTACAG ACTCGTACAT GCCACAGAAC TGGGCTGTTG CATACGGAGA
TTCCTCTCCA AGAGGCTATT CACCTACTAG AACTAGGGAC CCTTCCTTGA TCCTACCTAG
ACGCTTTCCT TTTCCAGAAG CTGGTGCTCA TGTTTTGCCT TTCAGGCAAT TTTCACGGCT
TAACCAAGCG CCGTTCACAC CGGCAAATCA AGGTCAACAA GGACAGGGTC AACAAGCTCA
AGGACGAGCT CCATCTACGG TAGTAAGACC AGAAACAAAT ACAACTACAA CCACAACTAA
TGTAAACAAT AATGGTAATG ATGGAAATAA TGGTAATAAT GGTAACGGCG ATCCTATAGT
TACTTCTAAT GGCACTCCTT TGAATGGTAC TACTACCACT ACAATAAATG CTGATGGTTC
TACCACAACA ACAACTACCT ACCGTTCTAC CTTTAATCCC TATGTTCAGT TTGGACCAAA
TATCACAATT CAAGACAATG ACCCAACAGG TGCACAAGTC AGAATCCGTA TGGTTCCCGT
CAATCCCCTC ACTCACCGTG CTGTAGTACC TACCAGAAAC GAGAGTCTTT CACCCAATGA
CAATGTTCCT GGTGCGTTGA CGCCGTTGTG GCTGCTGAGA AGTTCCAGCC CCGAAGTGCA
GGGAGGAACT GGAGGTCCAG AACGAGCCCG TAGAACTGGA GGTCAGTCAG GACGTATTCA
TCCATACACG AGACCCAATA ACGAGCAATC ATAGTAAATA GATAAAGTAT ATCAAATAGA
TGTTAGTGAA GTTTCAACTG TAGTATCATC AATTGAATAT GGTGTTCCG
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| Protein sequence | MDPAFLETTV MNLDVDSASN VDMQWLRNML DRALTASGLL PQRKSASEEA IDSLISVDLE
TLDEKDCPIC YDAYSDPHKN ESDRGKTRRS GKLCKDKESI AQIVEQDLEL CDLLGNQDIK
QETIQKKQQF TDPSLFMPVD ETSSNYIRFP TRNLVTFEEA NADDYFPGYV DEAKADGEKK
RRLDEAKAEG HVPVKMPSCD HVFGKPCIVE WLKSNVSCPL CRKEVKSAQE ENSISARRVA
EVADNISSNF NDRQGAISQI VDHSTDVFNP YRRPFSSAIT PLTDSYMPQN WAVAYGDSSP
RGYSPTRTRD PSLILPRRFP FPEAAQGRAP STVVRPETNT TTTTTNVNNN GNDGNNGNNG
NGDPIVTSNG TPLNGTTTTT INADGSTTTT TTYRSTFNPY SLSPNDNGGT GGPERARRTG
GQSGRIHPYT RPNNEQS
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