Gene PICST_84640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_84640 
SymbolPMT3 
ID4840091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp424262 
End bp425217 
Gene Length956 bp 
Protein Length292 aa 
Translation table12 
GC content44% 
IMG OID640391406 
Productmannosyltransferase 
Protein accessionXP_001385767 
Protein GI150866238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0707208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.69552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCGCCAATC TTAATAGCAA CTAATAAACA CCATAGACAC CACCATACAC CTACAAAACA 
CGGATATATC CAATAAAATG TTACACATAC CCCGCGGCCT CGTTATACGA GACGACTCAT
GCTCAGTGTT TGAAGGTGCC TCGACAGTCA ATCTTATCTT TCTGATCTTG ATAACATTAG
GGATTTTTAT CAGTTATCTT CCACAATACC ATCGGATATA CTCCAAAAGA ACGTCAGAAG
GTTTGTCAAC CAACTTTTTG CTTTTGGGAT CGTGTTCCTC CATCTTCACC CTAACGAATA
TCATTTTAGT ATCTTCCAAA GCCAGACACT GCTGTGCCAC CGGAGCACTC AACACCTTTA
ACTGTATCAA TTCACAACTC AACTTGGTCC AAATCGGATT GCAGTGCACT TGTGCCATAT
TGATTCTAGT TTTTGTGCTT ATCTTGACAC AAAACTCGTT GAAACAGGAT AAACACGAGT
ACCAACGTAT AGTGCAAGTC GGTAAACTCG TAGCTTTACA TGGAGTAGTT TCGATTGTTC
AGATAGTAGT AGGTCTCTAT TCAGACAAGT CGGTGCTCTA CTCAATTGCC AGCATCAATG
GATTGTTGTC GACGTTGTTA ACGGTGATCA AGTATGTGCC CCAAATCTAC ACTACTTACA
CCTTGAAGCA CCCAGGTACG TTGTCGATAG GAATGATGTG TATCCAGACT CCTGGTGGGT
TTGTATTCAC TGCCACATTG TTCTTCACCA AGGGCTCGCA TTGGAGTTCG TGGGTGTCGT
ACTTGGTCGC TGCTCTGCTT CAGGGTGTTT TGTTGGCTAT GTGTTTGTAC TATGAGTACT
TCCACAATAA GGGACAGGAT GCGGAGTTGG CTGAGCGTTT AGCAGTAGAG AGAATCATCG
CCGAAAACCT CCAGGAGCAG GAAATCGACG GTGAAGAGGC AGCTCCGTTG TTGTAG
 
Protein sequence
MLHIPRGLVI RDDSCSVFEG ASTVNLIFSI LITLGIFISY LPQYHRIYSK RTSEGLSTNF 
LLLGSCSSIF TLTNIILVSS KARHCCATGA LNTFNCINSQ LNLVQIGLQC TCAILILVFV
LILTQNSLKQ DKHEYQRIVQ VGKLVALHGV VSIVQIVVGL YSDKSVLYSI ASINGLLSTL
LTVIKYVPQI YTTYTLKHPG TLSIGMMCIQ TPGGFVFTAT LFFTKGSHWS SWVSYLVAAS
LQGVLLAMCL YYEYFHNKGQ DAELAERLAV ERIIAENLQE QEIDGEEAAP LL