| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84635 |
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| Symbol | SNF12 |
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| ID | 4840223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1492189 |
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| End bp | 1493741 |
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| Gene Length | 1553 bp |
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| Protein Length | 464 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391538 |
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| Product | subunit of SWI/SNF transcription activation complex |
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| Protein accession | XP_001385637 |
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| Protein GI | 150866144 |
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| COG category | [B] Chromatin structure and dynamics |
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| COG ID | [COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.157634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCATTCGAA ATTCACACAG ATAACTGCAA AGCAACAGCA TCAACAACCA CTTCAATCTC
ATTCCCGTAG CCAAGAGAAC ACCGTCTTAC ACATTCTTCA AATTCATTTC AGATTCTCTC
AATTATCTTT TTATATTCAT TACATTCGAC TGCAAAAGAT GCCACCAATT CCACAACGTC
ACGCTCCAGT CGTCAACAAA CCTCGTCCTG CTACCAATGC GACACCAGCA CTCTCATACA
CGCCCACAGA CACTTCGATC CCCCCTAGTC TCTACTCCAA GATTCCTAGC TTGGAGCTCT
ACAAAAAGCT TGAAGATGCT GAACGCGGAA TCGATTTACT TATTCTGAGA AAAGCACTCG
ACTTCCAGGC CATTCAACAG AAGACGATTC ACCCTTCTAA TTTCAAAGGC GAGACTGGCG
TGTTACGTGT CTTTGTCTAC AACACCTGCG ACAACCAACC TTGGCAAAAG CAATTGCTTC
ACGAACAGGG CATGCCTGTA GCAGATGCCA CTTCGGCGGA GGCTTCGTGG ACATTGCGTG
TAGAAGGTCG TTTTCTCGGT GATCATAAGC AAGATGCTAT CAACCCCGAA ACGGAAGCAT
TGAAGTTCTC GTCGTTCTTG TCGGCTCTCT CAATCGACTT GCTTCCCAAC GACGATTACC
CGGCTCTCCA AAACTCGCAG TCCAACATCA TCGAGTGGAG AAACGACCTC GTAGACCAGA
AGCCCAACTC TGCCAGTTTT GATGGCTTGG ATATCAAACG TAACGGTGTA TTCAAGATCA
ACACCAAAAT CGCTCTTTTG GTCAAGAGCC ATGCTGCGAC ATTCAAGCTC AGCGACGAAA
TGGCCCAGTT CACAGGAAAG CATGAATCAA CACAACAGGA GTTGATCTAT CTCGTATGGC
AATATGTTTT GTATAAAAAT CTCTTCCGTA AAACGGAATC TCTCACCAAA GTCGATGCAG
TTTCTACGTC GAACATCGTC ACTGAACCCA TGAACCAGGA CGACGATGAG GACGATCTCA
CTGTAGTTCA GGCTGACGAA GTGTTGCAGA ATCTCTTGAA TGTGAAAACC TTCAAGTTCT
CTGATTTGTA CAAGTTGTTG CAACCTCATT TCAAACCCAG GGCGCCTGTA ATCATCGACT
ATACTGTGGA TACAAGTAAG TCGTCTACTT TGGGCCAGAC AGTGATTGAT ATTCCTATCG
AGTTGCCTTT AAATCTCTCA AAGATCCAGA AGGAGTTGGT AGATCTCAAC AAGGTGGCGT
TTGAAAACCT CACCAGGGCT GACAACACCA TACTGCAGTT GAACTCAAGA ATTTCTTTGG
GTATAGTAGC TCTTCAAAAT GCTCATGGTA GAGAAAAATT CTACAGAGAG TTGAGCGAAG
ACCCAGTCAA GTTCATAGAG AGTTGGATTG AAACTCAAGC TGAAACCTTG AAGGCACTTA
AGAGCGACGA GGGCTACGAC GAAGAGCTCG TCAGAAGAGC AAAGTATTTC GAAGACAACG
AGCACTTGAT CAGAGAAAAA CTTGATCTTT TGCTTGGAGC AAGCAGATTC TAG
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| Protein sequence | MPPIPQRHAP VVNKPRPATN ATPALSYTPT DTSIPPSLYS KIPSLELYKK LEDAERGIDL
LISRKALDFQ AIQQKTIHPS NFKGETGVLR VFVYNTCDNQ PWQKQLLHEQ GMPVADATSA
EASWTLRVEG RFLGDHKQDA INPETEALKF SSFLSALSID LLPNDDYPAL QNSQSNIIEW
RNDLVDQKPN SASFDGLDIK RNGVFKINTK IALLVKSHAA TFKLSDEMAQ FTGKHESTQQ
ELIYLVWQYV LYKNLFRKTE SLTKVDAVST SNIVTEPMNQ DDDEDDLTVV QADEVLQNLL
NVKTFKFSDL YKLLQPHFKP RAPVIIDYTV DTSKSSTLGQ TVIDIPIELP LNLSKIQKEL
VDLNKVAFEN LTRADNTISQ LNSRISLGIV ALQNAHGREK FYRELSEDPV KFIESWIETQ
AETLKALKSD EGYDEELVRR AKYFEDNEHL IREKLDLLLG ASRF
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