Gene PICST_84419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_84419 
Symbol 
ID4840024 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp634937 
End bp636634 
Gene Length1698 bp 
Protein Length432 aa 
Translation table12 
GC content43% 
IMG OID640391339 
Productpredicted protein 
Protein accessionXP_001385822 
Protein GI126138598 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5019] Septin family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGTTGTTAGC GCTGTGACAT AATGACTTCT GGTATGTTCG GCTAAGATAA AAGATAAACA 
AGATAAAGAG AAGAACATAC AAGACACGGA TGGTACGCTA TGGCACGCTT TGATGTCTAC
CATAGACGTG GATGTTCTGT AGACATACAA CAGGTCCATG CCAGACGTAT TTTCTTCAAA
CCTAGGGATA CACGGCTCTA GTGTGTCTAG GCTGTGTTGA TCTTGTTACT TTGTACACTT
CCATACTAAC CATGACCACA GAAACAGAAA CAAGACCCGT TTCCATCGAG AACAAGATTC
CTATTCAGGA CATCAAGATC CTCAAGAAGA AGTTGAATGG CTATGTCGGC TTTGCCAACT
TGCCCAAACA ATGGCACAGA AAGTCGGTGA GAAGAGGGTT TTCATTGAAC ATCATGGTTG
CAGGAGAGAG TGGCTTGGGA AAGGCCACTT TGGTCAATAC TCTTTTCAAC AGAGAAATTA
TCAATCATGA GAATGACATT GACGACGAAG ATATCTCTGA CAAGGACGAC ATTTCCGTCA
AGATCAAGTC TACCACCGCT GAAATCGAAG AAGACGGCGT CAAGTTGTCT TTGAGTGTAG
TCACGGCTCC AGGATTTGGT GAGTCCATCA ACAACGTCGA CTCGTGGAAG CCTATTGTTG
ACGAAATCAA TAGCAGATTC GACTCCTACT TGGAGGCAGA GAGCAGAATA AACAGAACCA
CCACCGTCGA CAACAGAATT CATGCCTTTC TCTACTTCAT TGAGCCTACC GGCCATTCCT
TGAAGTCGTT GGACATTACA TTAATGAAAC AAGTGCACGA AAAGGTCAAC TTGATACCCA
TCATTGCCAA GTCTGATACC TTGACAGAAG AAGAAATTGC CGCTTTCAAG GGCAGAATCT
TGGACGACAT CAAGGCACAG GGAATCAAGA CTTTTTCTCC TTCGGACTAC GAGAATGATG
ATGAAGAAAC TGTGTTGAAC ACCAGACAGA TATTACAGAA GTTCCCCTTC GCTGTGGTGG
GCTCCACTAA AGAAGTCACC ACTGCGGACG GAAGACAGGT CAGAGGCAGA AAGTACCCAT
GGGGTGTAAT TGAAGTAGAT AACGAAGACC ACAACGATTT CATACAATTG CGTCAGTTGT
TGGTCAGAAA CTTCTTAGAA GAGTTGAAGG AGCAGACGTC CAACAACTTG TACGAGAACT
ACAGATCCGA GAAGTTGAAG AAGATGGGTA TCGAACAAGA CAACTCTGTT TTCAGAGAAT
TCGATCCCTT AACTAGACAA GAAGAGGAAA GAGCATTGCA CGAAGCCAAG TTGGCCAAGA
TGGAGGCCGA AATGAAGGCC GTTTTCCAAC AGAAGGTCTC AGAAAAGGAA AAGAAGTTGC
AGAGATCCGA AGCTGATCTT TTCTCCAGAC ACAAGGAGAT GAAGGACAAG TTAACCAAGC
AGATCAAGTT ATTGGAAGAC AAGAAAGTAC AATTGGAAAA GCAAAAGACG TTGCCCCAAG
ATCCACCAGC CCCAGCCCCA CAGAAGAGCC GTAAGGGATT CTTGCGTTAG GGTACTACGC
CTTTGTGACT TTTACTTTTC GATGCCACTT TCAAATGCGT TTGCTAGTGT GATCTCTATT
TCTAACCATT TACTTTCTCT GAATATATTG GTATAAATTC GGTAATAAAC AAGTGTAGAA
GAATAATTTA ATAATGCC
 
Protein sequence
MTSETETRPV SIENKIPIQD IKILKKKLNG YVGFANLPKQ WHRKSVRRGF SLNIMVAGES 
GLGKATLVNT LFNREIINHE NDIDDEDISD KDDISVKIKS TTAEIEEDGV KLSLSVVTAP
GFGESINNVD SWKPIVDEIN SRFDSYLEAE SRINRTTTVD NRIHAFLYFI EPTGHSLKSL
DITLMKQVHE KVNLIPIIAK SDTLTEEEIA AFKGRILDDI KAQGIKTFSP SDYENDDEET
VLNTRQILQK FPFAVVGSTK EVTTADGRQV RGRKYPWGVI EVDNEDHNDF IQLRQLLVRN
FLEELKEQTS NNLYENYRSE KLKKMGIEQD NSVFREFDPL TRQEEERALH EAKLAKMEAE
MKAVFQQKVS EKEKKLQRSE ADLFSRHKEM KDKLTKQIKL LEDKKVQLEK QKTLPQDPPA
PAPQKSRKGF LR