Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_84419 |
Symbol | |
ID | 4840024 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 634937 |
End bp | 636634 |
Gene Length | 1698 bp |
Protein Length | 432 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391339 |
Product | predicted protein |
Protein accession | XP_001385822 |
Protein GI | 126138598 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5019] Septin family protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TGTTGTTAGC GCTGTGACAT AATGACTTCT GGTATGTTCG GCTAAGATAA AAGATAAACA AGATAAAGAG AAGAACATAC AAGACACGGA TGGTACGCTA TGGCACGCTT TGATGTCTAC CATAGACGTG GATGTTCTGT AGACATACAA CAGGTCCATG CCAGACGTAT TTTCTTCAAA CCTAGGGATA CACGGCTCTA GTGTGTCTAG GCTGTGTTGA TCTTGTTACT TTGTACACTT CCATACTAAC CATGACCACA GAAACAGAAA CAAGACCCGT TTCCATCGAG AACAAGATTC CTATTCAGGA CATCAAGATC CTCAAGAAGA AGTTGAATGG CTATGTCGGC TTTGCCAACT TGCCCAAACA ATGGCACAGA AAGTCGGTGA GAAGAGGGTT TTCATTGAAC ATCATGGTTG CAGGAGAGAG TGGCTTGGGA AAGGCCACTT TGGTCAATAC TCTTTTCAAC AGAGAAATTA TCAATCATGA GAATGACATT GACGACGAAG ATATCTCTGA CAAGGACGAC ATTTCCGTCA AGATCAAGTC TACCACCGCT GAAATCGAAG AAGACGGCGT CAAGTTGTCT TTGAGTGTAG TCACGGCTCC AGGATTTGGT GAGTCCATCA ACAACGTCGA CTCGTGGAAG CCTATTGTTG ACGAAATCAA TAGCAGATTC GACTCCTACT TGGAGGCAGA GAGCAGAATA AACAGAACCA CCACCGTCGA CAACAGAATT CATGCCTTTC TCTACTTCAT TGAGCCTACC GGCCATTCCT TGAAGTCGTT GGACATTACA TTAATGAAAC AAGTGCACGA AAAGGTCAAC TTGATACCCA TCATTGCCAA GTCTGATACC TTGACAGAAG AAGAAATTGC CGCTTTCAAG GGCAGAATCT TGGACGACAT CAAGGCACAG GGAATCAAGA CTTTTTCTCC TTCGGACTAC GAGAATGATG ATGAAGAAAC TGTGTTGAAC ACCAGACAGA TATTACAGAA GTTCCCCTTC GCTGTGGTGG GCTCCACTAA AGAAGTCACC ACTGCGGACG GAAGACAGGT CAGAGGCAGA AAGTACCCAT GGGGTGTAAT TGAAGTAGAT AACGAAGACC ACAACGATTT CATACAATTG CGTCAGTTGT TGGTCAGAAA CTTCTTAGAA GAGTTGAAGG AGCAGACGTC CAACAACTTG TACGAGAACT ACAGATCCGA GAAGTTGAAG AAGATGGGTA TCGAACAAGA CAACTCTGTT TTCAGAGAAT TCGATCCCTT AACTAGACAA GAAGAGGAAA GAGCATTGCA CGAAGCCAAG TTGGCCAAGA TGGAGGCCGA AATGAAGGCC GTTTTCCAAC AGAAGGTCTC AGAAAAGGAA AAGAAGTTGC AGAGATCCGA AGCTGATCTT TTCTCCAGAC ACAAGGAGAT GAAGGACAAG TTAACCAAGC AGATCAAGTT ATTGGAAGAC AAGAAAGTAC AATTGGAAAA GCAAAAGACG TTGCCCCAAG ATCCACCAGC CCCAGCCCCA CAGAAGAGCC GTAAGGGATT CTTGCGTTAG GGTACTACGC CTTTGTGACT TTTACTTTTC GATGCCACTT TCAAATGCGT TTGCTAGTGT GATCTCTATT TCTAACCATT TACTTTCTCT GAATATATTG GTATAAATTC GGTAATAAAC AAGTGTAGAA GAATAATTTA ATAATGCC
|
Protein sequence | MTSETETRPV SIENKIPIQD IKILKKKLNG YVGFANLPKQ WHRKSVRRGF SLNIMVAGES GLGKATLVNT LFNREIINHE NDIDDEDISD KDDISVKIKS TTAEIEEDGV KLSLSVVTAP GFGESINNVD SWKPIVDEIN SRFDSYLEAE SRINRTTTVD NRIHAFLYFI EPTGHSLKSL DITLMKQVHE KVNLIPIIAK SDTLTEEEIA AFKGRILDDI KAQGIKTFSP SDYENDDEET VLNTRQILQK FPFAVVGSTK EVTTADGRQV RGRKYPWGVI EVDNEDHNDF IQLRQLLVRN FLEELKEQTS NNLYENYRSE KLKKMGIEQD NSVFREFDPL TRQEEERALH EAKLAKMEAE MKAVFQQKVS EKEKKLQRSE ADLFSRHKEM KDKLTKQIKL LEDKKVQLEK QKTLPQDPPA PAPQKSRKGF LR
|
| |